Gene Card
Best human hits
KATNB1; SNRNP40; WDR5B
Species
Unique Gene ID
Boschl.g00053823
Gene Model ID
Boschl.CG.Botznik2013.chr13.g53823
Location
chr13:4383628..4386017
Transcript Models and Sequences
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
8 results
| IPR Term | Analysis | Definition |
|---|---|---|
| WD40_repeat | ProSiteProfiles | WD40 repeat |
| WD40_repeat | SMART | WD40 repeat |
| WD40_repeat_dom | ProSiteProfiles | WD40-repeat-containing domain |
| WD40_repeat | Pfam | WD40 repeat |
| G-protein_beta_WD-40_rep | PRINTS | G-protein beta WD-40 repeat |
| WD40_repeat_CS | ProSitePatterns | WD40 repeat, conserved site |
| WD40_repeat_dom_sf | SUPERFAMILY | WD40-repeat-containing domain superfamily |
| WD40/YVTN_repeat-like_dom_sf | Gene3D | WD40/YVTN repeat-like-containing domain superfamily |
| GO Term | Annotation Origin | Type |
|---|
GO (Orthology)
19 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| RNA splicing, via transesterification reactions | Hs | biological process |
| mRNA splicing, via spliceosome | Hs | biological process |
| RNA binding | Hs | molecular function |
| protein binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| spliceosomal complex | Hs | cellular component |
| U5 snRNP | Hs | cellular component |
| small nucleolar ribonucleoprotein complex | Hs | cellular component |
| cytosol | Hs | cellular component |
| RNA processing | Hs | biological process |
| mRNA processing | Hs | biological process |
| RNA splicing | Hs | biological process |
| membrane | Hs | cellular component |
| integral component of membrane | Hs | cellular component |
| nuclear speck | Hs | cellular component |
| U2-type catalytic step 2 spliceosome | Hs | cellular component |
| precatalytic spliceosome | Hs | cellular component |
| catalytic step 2 spliceosome | Hs | cellular component |
GO (Blast)
33 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| spindle pole | Hs | cellular component | 122 | 7.16e-32 |
| RNA binding | Hs | molecular function | 331 | 1.18e-114 |
| protein binding | Hs | molecular function | 331 | 1.18e-114 |
| nucleus | Hs | cellular component | 331 | 1.18e-114 |
| nucleoplasm | Hs | cellular component | 331 | 1.18e-114 |
| spliceosomal complex | Hs | cellular component | 331 | 1.18e-114 |
| U5 snRNP | Hs | cellular component | 331 | 1.18e-114 |
| small nucleolar ribonucleoprotein complex | Hs | cellular component | 331 | 1.18e-114 |
| cytoplasm | Hs | cellular component | 122 | 7.16e-32 |
| centrosome | Hs | cellular component | 122 | 7.16e-32 |
| microtubule organizing center | Hs | cellular component | 122 | 7.16e-32 |
| spindle | Hs | cellular component | 122 | 7.16e-32 |
| cytosol | Hs | cellular component | 331 | 1.18e-114 |
| cytoskeleton | Hs | cellular component | 122 | 7.16e-32 |
| microtubule | Hs | cellular component | 122 | 7.16e-32 |
| plasma membrane | Hs | cellular component | 122 | 7.16e-32 |
| microtubule binding | Hs | molecular function | 122 | 7.16e-32 |
| katanin complex | Hs | cellular component | 122 | 7.16e-32 |
| microtubule-severing ATPase activity | Hs | molecular function | 122 | 7.16e-32 |
| microtubule cytoskeleton | Hs | cellular component | 122 | 7.16e-32 |
| membrane | Hs | cellular component | 331 | 1.18e-114 |
| integral component of membrane | Hs | cellular component | 331 | 1.18e-114 |
| nuclear speck | Hs | cellular component | 331 | 1.18e-114 |
| axon | Hs | cellular component | 122 | 7.16e-32 |
| growth cone | Hs | cellular component | 122 | 7.16e-32 |
| midbody | Hs | cellular component | 122 | 7.16e-32 |
| ciliary basal body | Hs | cellular component | 108 | 3.98e-28 |
| neuronal cell body | Hs | cellular component | 122 | 7.16e-32 |
| protein heterodimerization activity | Hs | molecular function | 122 | 7.16e-32 |
| dynein complex binding | Hs | molecular function | 122 | 7.16e-32 |
| U2-type catalytic step 2 spliceosome | Hs | cellular component | 331 | 1.18e-114 |
| precatalytic spliceosome | Hs | cellular component | 331 | 1.18e-114 |
| catalytic step 2 spliceosome | Hs | cellular component | 331 | 1.18e-114 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| protein binding | Gene3D | molecular function | 2.7E-77 |
