Gene Card
Best human hits
ASCC3; HFM1; SNRNP200
Species
Unique Gene ID
Boschl.g00022170
Gene Model ID
Boschl.CG.Botznik2013.chr2.g22170
Location
chr2:7355591..7365629
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
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You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
11 results
| IPR Term | Analysis | Definition |
|---|---|---|
| P-loop_NTPase | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolase |
| Helicase_C | ProSiteProfiles | Helicase, C-terminal |
| WH_DNA-bd_sf | SUPERFAMILY | Winged helix DNA-binding domain superfamily |
| Sec63-dom | SMART | Sec63 domain |
| Ig_E-set | SUPERFAMILY | Immunoglobulin E-set |
| C2_domain_sf | Gene3D | C2 domain superfamily |
| Helicase_ATP-bd | SMART | Helicase superfamily 1/2, ATP-binding domain |
| DEAD/DEAH_box_helicase_dom | Pfam | DEAD/DEAH box helicase domain |
| Helicase_ATP-bd | ProSiteProfiles | Helicase superfamily 1/2, ATP-binding domain |
| Sec63-dom | Pfam | Sec63 domain |
| Helicase_C | SMART | Helicase, C-terminal |
| GO Term | Annotation Origin | Type |
|---|
GO (Orthology)
22 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| nucleotide binding | Hs | molecular function |
| mRNA splicing, via spliceosome | Hs | biological process |
| osteoblast differentiation | Hs | biological process |
| nucleic acid binding | Hs | molecular function |
| RNA binding | Hs | molecular function |
| ATP-dependent RNA helicase activity | Hs | molecular function |
| helicase activity | Hs | molecular function |
| protein binding | Hs | molecular function |
| ATP binding | Hs | molecular function |
| nucleus | Hs | cellular component |
| nucleoplasm | Hs | cellular component |
| spliceosomal complex | Hs | cellular component |
| U5 snRNP | Hs | cellular component |
| mRNA processing | Hs | biological process |
| ATP-dependent helicase activity | Hs | molecular function |
| RNA splicing | Hs | biological process |
| membrane | Hs | cellular component |
| hydrolase activity | Hs | molecular function |
| intracellular ribonucleoprotein complex | Hs | cellular component |
| identical protein binding | Hs | molecular function |
| U4/U6 x U5 tri-snRNP complex | Hs | cellular component |
| catalytic step 2 spliceosome | Hs | cellular component |
GO (Blast)
24 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleotide binding | Hs | molecular function | 1683 | 0.0 |
| nucleic acid binding | Hs | molecular function | 1683 | 0.0 |
| RNA binding | Hs | molecular function | 1683 | 0.0 |
| ATP-dependent RNA helicase activity | Hs | molecular function | 1683 | 0.0 |
| helicase activity | Hs | molecular function | 1683 | 0.0 |
| protein binding | Hs | molecular function | 1683 | 0.0 |
| ATP binding | Hs | molecular function | 1683 | 0.0 |
| intracellular | Hs | cellular component | 818 | 0.0 |
| nucleus | Hs | cellular component | 1683 | 0.0 |
| nucleoplasm | Hs | cellular component | 1683 | 0.0 |
| spliceosomal complex | Hs | cellular component | 1683 | 0.0 |
| U5 snRNP | Hs | cellular component | 1683 | 0.0 |
| nucleolus | Hs | cellular component | 298 | 2.04e-84 |
| cytoplasm | Hs | cellular component | 298 | 2.04e-84 |
| cytosol | Hs | cellular component | 818 | 0.0 |
| ATP-dependent helicase activity | Hs | molecular function | 1683 | 0.0 |
| membrane | Hs | cellular component | 1683 | 0.0 |
| hydrolase activity | Hs | molecular function | 1683 | 0.0 |
| intracellular ribonucleoprotein complex | Hs | cellular component | 1683 | 0.0 |
| identical protein binding | Hs | molecular function | 1683 | 0.0 |
| ATP-dependent 3'-5' DNA helicase activity | Hs | molecular function | 818 | 0.0 |
| U4/U6 x U5 tri-snRNP complex | Hs | cellular component | 1683 | 0.0 |
| catalytic step 2 spliceosome | Hs | cellular component | 1683 | 0.0 |
| activating signal cointegrator 1 complex | Hs | cellular component | 818 | 0.0 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | Pfam | molecular function | 4.0E-25 |
| ATP binding | Pfam | molecular function | 4.0E-25 |
