Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

KDM2A; KDM2B; PHF8

Species

B.schlosseri

Unique Gene ID

Boschl.g00039867

Gene Model ID

Boschl.CG.Botznik2013.chr2.g39867

Location

chr2:4772858..4777319

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chr2.g39867.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
JmjC_dom SMART JmjC domain
JmjC_dom ProSiteProfiles JmjC domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

38 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function
DNA binding Hs molecular function
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
nucleolus Hs cellular component
double-strand break repair via nonhomologous end joining Hs biological process
chromatin organization Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
spermatogenesis Hs biological process
methyltransferase activity Hs molecular function
zinc ion binding Hs molecular function
oxidoreductase activity Hs molecular function
rRNA binding Hs molecular function
midbrain-hindbrain boundary morphogenesis Hs biological process
fourth ventricle development Hs biological process
lateral ventricle development Hs biological process
third ventricle development Hs biological process
positive regulation of cell growth Hs biological process
forebrain development Hs biological process
midbrain development Hs biological process
hindbrain development Hs biological process
PcG protein complex Hs cellular component
methylation Hs biological process
histone demethylase activity Hs molecular function
histone H2A monoubiquitination Hs biological process
negative regulation of neuron apoptotic process Hs biological process
metal ion binding Hs molecular function
embryonic camera-type eye morphogenesis Hs biological process
dioxygenase activity Hs molecular function
histone demethylase activity (H3-K36 specific) Hs molecular function
oxidation-reduction process Hs biological process
histone H3-K36 demethylation Hs biological process
positive regulation of stem cell population maintenance Hs biological process
negative regulation of neural precursor cell proliferation Hs biological process

GO (Blast)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 406 9.75e-130
DNA binding Hs molecular function 451 2.34e-148
chromatin binding Hs molecular function 289 7.39e-88
RNA binding Hs molecular function 406 9.75e-130
iron ion binding Hs molecular function 289 7.39e-88
protein binding Hs molecular function 451 2.34e-148
nucleus Hs cellular component 451 2.34e-148
nucleoplasm Hs cellular component 451 2.34e-148
nucleolus Hs cellular component 406 9.75e-130
methyltransferase activity Hs molecular function 451 2.34e-148
zinc ion binding Hs molecular function 451 2.34e-148
oxidoreductase activity Hs molecular function 451 2.34e-148
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors Hs molecular function 289 7.39e-88
rRNA binding Hs molecular function 406 9.75e-130
PcG protein complex Hs cellular component 406 9.75e-130
nuclear membrane Hs cellular component 289 7.39e-88
histone demethylase activity Hs molecular function 451 2.34e-148
histone demethylase activity (H3-K9 specific) Hs molecular function 289 7.39e-88
methylated histone binding Hs molecular function 289 7.39e-88
histone demethylase activity (H4-K20 specific) Hs molecular function 289 7.39e-88
metal ion binding Hs molecular function 451 2.34e-148
dioxygenase activity Hs molecular function 451 2.34e-148
histone demethylase activity (H3-K36 specific) Hs molecular function 451 2.34e-148
histone demethylase activity (H3-K27 specific) Hs molecular function 289 7.39e-88

GO (InterProScan)

No result

GO Term Analysis Type e-value

Back to Top