Gene Card
Best human hits
TRIM54; TRIM55; TRIM63
Species
Unique Gene ID
Boschl.g00067254
Gene Model ID
Boschl.CG.Botznik2013.chr2.g67254
Location
chr2:622700..628891
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
10 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Znf_RING | ProSiteProfiles | Zinc finger, RING-type |
| Znf_RING_CS | ProSitePatterns | Zinc finger, RING-type, conserved site |
| COS_domain | ProSiteProfiles | COS domain |
| Znf-RING_LisH | Pfam | RING-type zinc-finger, LisH dimerisation motif |
| Znf_B-box | Pfam | B-box-type zinc finger |
| Znf_B-box | ProSiteProfiles | B-box-type zinc finger |
| Znf_B-box | SMART | B-box-type zinc finger |
| Znf_RING | SMART | Zinc finger, RING-type |
| Znf_B-box | CDD | B-box-type zinc finger |
| Znf_RING/FYVE/PHD | Gene3D | Zinc finger, RING/FYVE/PHD-type |
| GO Term | Annotation Origin | Type |
|---|
GO (Orthology)
29 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| ubiquitin-protein transferase activity | Hs | molecular function |
| signal transducer activity | Hs | molecular function |
| protein binding | Hs | molecular function |
| intracellular | Hs | cellular component |
| nucleus | Hs | cellular component |
| cytoplasm | Hs | cellular component |
| cytoskeleton | Hs | cellular component |
| microtubule | Hs | cellular component |
| microtubule associated complex | Hs | cellular component |
| muscle contraction | Hs | biological process |
| microtubule-based process | Hs | biological process |
| negative regulation of microtubule depolymerization | Hs | biological process |
| signal transduction | Hs | biological process |
| multicellular organism development | Hs | biological process |
| microtubule binding | Hs | molecular function |
| zinc ion binding | Hs | molecular function |
| skeletal muscle atrophy | Hs | biological process |
| protein ubiquitination | Hs | biological process |
| transferase activity | Hs | molecular function |
| Z disc | Hs | cellular component |
| cell differentiation | Hs | biological process |
| M band | Hs | cellular component |
| titin binding | Hs | molecular function |
| identical protein binding | Hs | molecular function |
| contractile fiber | Hs | cellular component |
| metal ion binding | Hs | molecular function |
| response to glucocorticoid | Hs | biological process |
| muscle cell development | Hs | biological process |
| regulation of microtubule cytoskeleton organization | Hs | biological process |
GO (Blast)
18 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| ubiquitin-protein transferase activity | Hs | molecular function | 328 | 9.42e-109 |
| signal transducer activity | Hs | molecular function | 328 | 9.42e-109 |
| protein binding | Hs | molecular function | 328 | 9.42e-109 |
| intracellular | Hs | cellular component | 328 | 9.42e-109 |
| nucleus | Hs | cellular component | 328 | 9.42e-109 |
| cytoplasm | Hs | cellular component | 328 | 9.42e-109 |
| cytoskeleton | Hs | cellular component | 309 | 1.28e-100 |
| microtubule | Hs | cellular component | 328 | 9.42e-109 |
| microtubule associated complex | Hs | cellular component | 309 | 1.28e-100 |
| microtubule binding | Hs | molecular function | 309 | 1.28e-100 |
| zinc ion binding | Hs | molecular function | 328 | 9.42e-109 |
| transferase activity | Hs | molecular function | 328 | 9.42e-109 |
| Z disc | Hs | cellular component | 328 | 9.42e-109 |
| M band | Hs | cellular component | 328 | 9.42e-109 |
| titin binding | Hs | molecular function | 328 | 9.42e-109 |
| identical protein binding | Hs | molecular function | 318 | 2.21e-102 |
| contractile fiber | Hs | cellular component | 328 | 9.42e-109 |
| metal ion binding | Hs | molecular function | 328 | 9.42e-109 |
GO (InterProScan)
2 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| intracellular | Pfam | cellular component | 6.0E-6 |
| zinc ion binding | Pfam | molecular function | 6.0E-6 |
