Login
Help

GENE CARD

Submit your Data

  1. Gene 'Boschl.CG.Botznik201...'

Gene Card

Best human hits

MAP1LC3A; MAP1LC3B; MAP1LC3B2

Species

B.schlosseri

Unique Gene ID

Boschl.g00003133

Gene Model ID

Boschl.CG.Botznik2013.chr5.g03133

Location

chr5:22958202..22961021

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chr5.g03133.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Atg8-like Pfam Autophagy protein Atg8 ubiquitin-like
Atg8-like PANTHER Autophagy protein Atg8 ubiquitin-like
Ubiquitin-like_domsf SUPERFAMILY Ubiquitin-like domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

30 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
autophagosome assembly Hs biological process
autophagosome membrane Hs cellular component
autophagy of mitochondrion Hs biological process
protein binding Hs molecular function
phospholipid binding Hs molecular function
intracellular Hs cellular component
cytoplasm Hs cellular component
mitochondrion Hs cellular component
late endosome Hs cellular component
autophagosome Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
microtubule Hs cellular component
axoneme Hs cellular component
autophagy Hs biological process
cellular response to nitrogen starvation Hs biological process
phosphatidylethanolamine binding Hs molecular function
cellular response to starvation Hs biological process
response to iron(II) ion Hs biological process
endomembrane system Hs cellular component
membrane Hs cellular component
macroautophagy Hs biological process
organelle membrane Hs cellular component
cytoplasmic vesicle Hs cellular component
ubiquitin protein ligase binding Hs molecular function
response to nutrient levels Hs biological process
cellular response to amino acid starvation Hs biological process
autolysosome Hs cellular component
cellular response to hydrogen peroxide Hs biological process
autophagosome maturation Hs biological process

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
autophagosome membrane Hs cellular component 155 1.49e-49
protein binding Hs molecular function 155 1.49e-49
phospholipid binding Hs molecular function 155 1.49e-49
intracellular Hs cellular component 153 1.74e-48
cytoplasm Hs cellular component 155 1.49e-49
mitochondrion Hs cellular component 153 1.74e-48
late endosome Hs cellular component 155 1.49e-49
autophagosome Hs cellular component 155 1.49e-49
cytosol Hs cellular component 155 1.49e-49
cytoskeleton Hs cellular component 155 1.49e-49
microtubule Hs cellular component 155 1.49e-49
axoneme Hs cellular component 153 1.74e-48
phosphatidylethanolamine binding Hs molecular function 155 1.49e-49
endomembrane system Hs cellular component 155 1.49e-49
membrane Hs cellular component 155 1.49e-49
organelle membrane Hs cellular component 155 1.49e-49
cytoplasmic vesicle Hs cellular component 155 1.49e-49
ubiquitin protein ligase binding Hs molecular function 155 1.49e-49
autolysosome Hs cellular component 155 1.49e-49

GO (InterProScan)

No result

GO Term Analysis Type e-value