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GENE CARD

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Gene Card

Best human hits

NFIA; NFIB; NFIX

Species

B.schlosseri

Unique Gene ID

Boschl.g00046726

Gene Model ID

Boschl.CG.Botznik2013.chr5.g46726

Location

chr5:16362322..16376206

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chr5.g46726.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
CTF/NFI_DNA-bd_N Pfam CTF transcription factor/nuclear factor 1, N-terminal
CTF/NFI_DNA-bd_CS ProSitePatterns CTF transcription factor/nuclear factor 1, conserved site
CTF/NFI_DNA-bd-dom ProSiteProfiles CTF transcription factor/nuclear factor 1, DNA-binding domain
MAD_homology1_Dwarfin-type Pfam MAD homology 1, Dwarfin-type
MAD_homology1_Dwarfin-type SMART MAD homology 1, Dwarfin-type
CTF/NFI Pfam CTF transcription factor/nuclear factor 1

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

36 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function
fibrillar center Hs cellular component
chondrocyte differentiation Hs biological process
DNA binding Hs molecular function
chromatin binding Hs molecular function
double-stranded DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function
protein binding Hs molecular function
intracellular Hs cellular component
nucleus Hs cellular component
nucleoplasm Hs cellular component
DNA replication Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
transcription from RNA polymerase II promoter Hs biological process
transcription factor binding Hs molecular function
negative regulation of cell proliferation Hs biological process
glial cell differentiation Hs biological process
viral genome replication Hs biological process
anterior commissure morphogenesis Hs biological process
cell junction Hs cellular component
lung development Hs biological process
forebrain development Hs biological process
hindbrain development Hs biological process
cerebellar mossy fiber Hs cellular component
positive regulation of transcription from RNA polymerase II promoter Hs biological process
synapse maturation Hs biological process
salivary gland cavitation Hs biological process
commissural neuron axon guidance Hs biological process
negative regulation of pri-miRNA transcription from RNA polymerase II promoter Hs biological process
core promoter proximal region sequence-specific DNA binding Hs molecular function
negative regulation of transcription, DNA-templated Hs biological process

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 365 4.83e-117
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 369 2.07e-119
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 365 4.83e-117
fibrillar center Hs cellular component 365 4.83e-117
DNA binding Hs molecular function 369 2.07e-119
chromatin binding Hs molecular function 363 1.94e-116
double-stranded DNA binding Hs molecular function 365 4.83e-117
transcription factor activity, sequence-specific DNA binding Hs molecular function 369 2.07e-119
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function 369 2.07e-119
protein binding Hs molecular function 369 2.07e-119
intracellular Hs cellular component 369 2.07e-119
nucleus Hs cellular component 369 2.07e-119
nucleoplasm Hs cellular component 369 2.07e-119
transcription factor binding Hs molecular function 363 1.94e-116
cell junction Hs cellular component 363 1.94e-116
cerebellar mossy fiber Hs cellular component 365 4.83e-117

GO (InterProScan)

5 results

GO Term Analysis Type e-value
transcription factor activity, sequence-specific DNA binding Pfam molecular function 2.2E-7
intracellular SMART cellular component 5.9E-20
nucleus Pfam cellular component 2.2E-7
DNA replication Pfam biological process 2.2E-7
regulation of transcription, DNA-templated SMART biological process 5.9E-20

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