Gene Card
Best human hits
NXF1; NXF2; NXF2B
Species
Unique Gene ID
Boschl.g00048849
Gene Model ID
Boschl.CG.Botznik2013.chr5.g48849
Location
chr5:15499933..15510831
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
15 results
| IPR Term | Analysis | Definition |
|---|---|---|
| RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
| TAP_C_dom | SMART | TAP C-terminal (TAP-C) domain |
| NTF2 | Pfam | Nuclear transport factor 2 |
| NTF2-like_dom_sf | SUPERFAMILY | NTF2-like domain superfamily |
| TAP_C_dom | ProSiteProfiles | TAP C-terminal (TAP-C) domain |
| Leu-rich_rpt | ProSiteProfiles | Leucine-rich repeat |
| Tap_RNA-bd | Pfam | Nuclear RNA export factor Tap, RNA-binding domain |
| UBA-like_sf | SUPERFAMILY | UBA-like superfamily |
| Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
| LRR_dom_sf | Gene3D | Leucine-rich repeat domain superfamily |
| Tap_RNA-bd | ProDom | Nuclear RNA export factor Tap, RNA-binding domain |
| Nuclear_transport_factor_2_euk | ProSiteProfiles | Nuclear transport factor 2, eukaryote |
| NXF_fam | PANTHER | Nuclear RNA export factor |
| TAP_C_dom | CDD | TAP C-terminal (TAP-C) domain |
| TAP_C_dom | Pfam | TAP C-terminal (TAP-C) domain |
| GO Term | Annotation Origin | Type |
|---|
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
13 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| transcription export complex | Hs | cellular component | 357 | 5.98e-117 |
| nucleic acid binding | Hs | molecular function | 357 | 5.98e-117 |
| RNA binding | Hs | molecular function | 357 | 5.98e-117 |
| mRNA binding | Hs | molecular function | 357 | 5.98e-117 |
| protein binding | Hs | molecular function | 357 | 5.98e-117 |
| nucleus | Hs | cellular component | 357 | 5.98e-117 |
| nuclear pore | Hs | cellular component | 357 | 5.98e-117 |
| nucleoplasm | Hs | cellular component | 357 | 5.98e-117 |
| cytoplasm | Hs | cellular component | 357 | 5.98e-117 |
| cytosol | Hs | cellular component | 357 | 5.98e-117 |
| nuclear speck | Hs | cellular component | 357 | 5.98e-117 |
| nuclear RNA export factor complex | Hs | cellular component | 286 | 1.39e-89 |
| nuclear inclusion body | Hs | cellular component | 357 | 5.98e-117 |
GO (InterProScan)
7 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SUPERFAMILY | molecular function | 4.49E-10 |
| RNA binding | Pfam | molecular function | 2.6E-14 |
| protein binding | SUPERFAMILY | molecular function | 7.65E-15 |
| nucleus | CDD | cellular component | 1.91985E-19 |
| cytoplasm | Pfam | cellular component | 2.6E-14 |
| mRNA export from nucleus | Pfam | biological process | 2.6E-14 |
| mRNA transport | CDD | biological process | 1.91985E-19 |
