- Gene 'Boschl.CG.Botznik201...'
Gene Card
Best human hits
COL12A1; COL7A1; TNN
Species
Unique Gene ID
Boschl.g00007951
Gene Model ID
Boschl.CG.Botznik2013.chr6.g07951
Location
chr6:8477754..8490057
Transcript Models and Sequences
n/a
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The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
8 results
| IPR Term | Analysis | Definition |
|---|---|---|
| FN3_sf | SUPERFAMILY | Fibronectin type III superfamily |
| FN3_dom | CDD | Fibronectin type III |
| FN3_dom | ProSiteProfiles | Fibronectin type III |
| EGF-like_CS | ProSitePatterns | EGF-like, conserved site |
| EGF-like_dom | SMART | EGF-like domain |
| EGF-like_dom | ProSiteProfiles | EGF-like domain |
| Ig-like_fold | Gene3D | Immunoglobulin-like fold |
| FN3_dom | SMART | Fibronectin type III |
| GO Term | Annotation Origin | Type |
|---|
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
25 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| Golgi membrane | Hs | cellular component | 89.4 | 5.37e-18 |
| serine-type endopeptidase inhibitor activity | Hs | molecular function | 89.4 | 5.37e-18 |
| integrin binding | Hs | molecular function | 82.8 | 4.83e-16 |
| protein binding | Hs | molecular function | 89.4 | 5.37e-18 |
| extracellular region | Hs | cellular component | 89.4 | 5.37e-18 |
| proteinaceous extracellular matrix | Hs | cellular component | 89.4 | 5.37e-18 |
| collagen trimer | Hs | cellular component | 89.4 | 5.37e-18 |
| collagen type VII trimer | Hs | cellular component | 89.4 | 5.37e-18 |
| collagen type XII trimer | Hs | cellular component | 82.0 | 8.02e-16 |
| basement membrane | Hs | cellular component | 89.4 | 5.37e-18 |
| extracellular space | Hs | cellular component | 89.4 | 5.37e-18 |
| endoplasmic reticulum lumen | Hs | cellular component | 89.4 | 5.37e-18 |
| cell surface | Hs | cellular component | 82.8 | 4.83e-16 |
| extracellular matrix structural constituent conferring tensile strength | Hs | molecular function | 82.0 | 8.02e-16 |
| COPII-coated ER to Golgi transport vesicle | Hs | cellular component | 89.4 | 5.37e-18 |
| peptidase inhibitor activity | Hs | molecular function | 89.4 | 5.37e-18 |
| extracellular matrix | Hs | cellular component | 89.4 | 5.37e-18 |
| endoplasmic reticulum-Golgi intermediate compartment membrane | Hs | cellular component | 89.4 | 5.37e-18 |
| identical protein binding | Hs | molecular function | 89.4 | 5.37e-18 |
| neuron projection | Hs | cellular component | 82.8 | 4.83e-16 |
| neuronal cell body | Hs | cellular component | 82.8 | 4.83e-16 |
| extracellular exosome | Hs | cellular component | 82.0 | 8.02e-16 |
| CA3 pyramidal cell dendrite | Hs | cellular component | 82.8 | 4.83e-16 |
| extracellular vesicle | Hs | cellular component | 82.0 | 8.02e-16 |
| hippocampal mossy fiber expansion | Hs | cellular component | 82.8 | 4.83e-16 |
GO (InterProScan)
1 result
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| protein binding | SUPERFAMILY | molecular function | 7.78E-12 |
