Gene Card
Best human hits
TBX19; TBX6; TBXT
Species
Unique Gene ID
Boschl.g00063408
Gene Model ID
Boschl.CG.Botznik2013.chr7.g63408
Location
chr7:1954605..1956796
Transcript Models and Sequences
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
9 results
| IPR Term | Analysis | Definition |
|---|---|---|
| T-box_sf | Gene3D | T-box superfamily |
| TF_T-box | PRINTS | Transcription factor, T-box |
| TF_T-box | SMART | Transcription factor, T-box |
| TF_T-box | ProSiteProfiles | Transcription factor, T-box |
| TF_Brachyury | PRINTS | Transcription factor, Brachyury |
| TF_T-box_CS | ProSitePatterns | Transcription factor, T-box, conserved site |
| p53-like_TF_DNA-bd | SUPERFAMILY | p53-like transcription factor, DNA-binding |
| TF_T-box | Pfam | Transcription factor, T-box |
| TF_T-box | PANTHER | Transcription factor, T-box |
| GO Term | Annotation Origin | Type |
|---|
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
17 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| chromatin | Hs | cellular component | 228 | 2.17e-74 |
| nuclear chromatin | Hs | cellular component | 228 | 2.17e-74 |
| RNA polymerase II core promoter proximal region sequence-specific DNA binding | Hs | molecular function | 228 | 2.17e-74 |
| RNA polymerase II distal enhancer sequence-specific DNA binding | Hs | molecular function | 228 | 2.17e-74 |
| RNA polymerase II transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 228 | 2.17e-74 |
| transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding | Hs | molecular function | 215 | 3.71e-69 |
| RNA polymerase II transcription factor binding | Hs | molecular function | 228 | 2.17e-74 |
| RNA polymerase II activating transcription factor binding | Hs | molecular function | 228 | 2.17e-74 |
| enhancer sequence-specific DNA binding | Hs | molecular function | 215 | 3.71e-69 |
| transcriptional repressor activity, RNA polymerase II transcription factor binding | Hs | molecular function | 228 | 2.17e-74 |
| DNA binding | Hs | molecular function | 228 | 2.17e-74 |
| transcription factor activity, sequence-specific DNA binding | Hs | molecular function | 228 | 2.17e-74 |
| transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding | Hs | molecular function | 228 | 2.17e-74 |
| protein binding | Hs | molecular function | 149 | 5.17e-44 |
| nucleus | Hs | cellular component | 228 | 2.17e-74 |
| cytoplasm | Hs | cellular component | 228 | 2.17e-74 |
| sequence-specific DNA binding | Hs | molecular function | 228 | 2.17e-74 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| transcription factor activity, sequence-specific DNA binding | PANTHER | molecular function | 5.6E-90 |
| nucleus | PANTHER | cellular component | 5.6E-90 |
| regulation of transcription, DNA-templated | PANTHER | biological process | 5.6E-90 |
