Gene Card
Best human hits
PCDHB11; PCDHB16; PCDHB6
Species
Unique Gene ID
Boschl.g00008885
Gene Model ID
Boschl.CG.Botznik2013.chr8.g08885
Location
chr8:1945600..1948731
Transcript Models and Sequences
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
5 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Cadherin | PRINTS | Cadherin |
| Cadherin-like | SUPERFAMILY | Cadherin-like |
| Cadherin | SMART | Cadherin |
| Cadherin_CS | ProSitePatterns | Cadherin conserved site |
| Cadherin | Pfam | Cadherin |
| GO Term | Annotation Origin | Type |
|---|
GO (Orthology)
41 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|---|---|
| calcium ion binding | Hs | molecular function |
| plasma membrane | Hs | cellular component |
| integral component of plasma membrane | Hs | cellular component |
| cell adhesion | Hs | biological process |
| homophilic cell adhesion via plasma membrane adhesion molecules | Hs | biological process |
| nervous system development | Hs | biological process |
| membrane | Hs | cellular component |
| integral component of membrane | Hs | cellular component |
| calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules | Hs | biological process |
| metal ion binding | Hs | molecular function |
| cornified envelope | Hs | cellular component |
| virus receptor activity | Hs | molecular function |
| desmosome organization | Hs | biological process |
| protein binding | Hs | molecular function |
| cytosol | Hs | cellular component |
| cell-cell junction | Hs | cellular component |
| cell-cell junction assembly | Hs | biological process |
| cell-cell signaling | Hs | biological process |
| cytoplasmic side of plasma membrane | Hs | cellular component |
| cell surface | Hs | cellular component |
| intercalated disc | Hs | cellular component |
| toxic substance binding | Hs | molecular function |
| viral process | Hs | biological process |
| apical plasma membrane | Hs | cellular component |
| lateral plasma membrane | Hs | cellular component |
| cell junction | Hs | cellular component |
| desmosome | Hs | cellular component |
| keratinocyte differentiation | Hs | biological process |
| BMP signaling pathway | Hs | biological process |
| response to progesterone | Hs | biological process |
| intracellular membrane-bounded organelle | Hs | cellular component |
| gamma-catenin binding | Hs | molecular function |
| viral entry into host cell | Hs | biological process |
| protein stabilization | Hs | biological process |
| cell adhesion molecule binding | Hs | molecular function |
| extracellular exosome | Hs | cellular component |
| cornification | Hs | biological process |
| cell adhesive protein binding involved in bundle of His cell-Purkinje myocyte communication | Hs | molecular function |
| regulation of heart rate by cardiac conduction | Hs | biological process |
| cell-cell adhesion | Hs | biological process |
| ficolin-1-rich granule membrane | Hs | cellular component |
GO (Blast)
7 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| calcium ion binding | Hs | molecular function | 168 | 9.06e-47 |
| plasma membrane | Hs | cellular component | 168 | 9.06e-47 |
| integral component of plasma membrane | Hs | cellular component | 168 | 9.06e-47 |
| membrane | Hs | cellular component | 168 | 9.06e-47 |
| integral component of membrane | Hs | cellular component | 168 | 9.06e-47 |
| identical protein binding | Hs | molecular function | 160 | 3.72e-44 |
| metal ion binding | Hs | molecular function | 160 | 3.72e-44 |
GO (InterProScan)
5 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| calcium ion binding | SUPERFAMILY | molecular function | 2.51E-25 |
| plasma membrane | ProSitePatterns | cellular component | |
| cell adhesion | ProSitePatterns | biological process | |
| homophilic cell adhesion via plasma membrane adhesion molecules | PRINTS | biological process | 9.8E-25 |
| membrane | SUPERFAMILY | cellular component | 2.51E-25 |
