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GENE CARD

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Gene Card

Best human hits

COCH; CRISPLD2; VIT

Species

B.schlosseri

Unique Gene ID

Boschl.g00056604

Gene Model ID

Boschl.CG.Botznik2013.chr9.g56604

Location

chr9:6322635..6337612

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chr9.g56604.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
LCCL_sf Gene3D LCCL domain superfamily
LCCL_sf SUPERFAMILY LCCL domain superfamily
LCCL ProSiteProfiles LCCL domain
LCCL SMART LCCL domain
LCCL Pfam LCCL domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein binding Hs molecular function 69.3 3.98e-12
collagen binding Hs molecular function 69.3 3.98e-12
glycosaminoglycan binding Hs molecular function 81.6 5.40e-16
extracellular region Hs cellular component 81.6 5.40e-16
proteinaceous extracellular matrix Hs cellular component 81.6 5.40e-16
interstitial matrix Hs cellular component 75.9 4.49e-14
heparin binding Hs molecular function 81.6 5.40e-16
transport vesicle Hs cellular component 81.6 5.40e-16
extracellular matrix Hs cellular component 69.3 3.98e-12
secretory granule lumen Hs cellular component 81.6 5.40e-16
extracellular exosome Hs cellular component 81.6 5.40e-16
ficolin-1-rich granule lumen Hs cellular component 81.6 5.40e-16

GO (InterProScan)

No result

GO Term Analysis Type e-value