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GENE CARD

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Gene Card

Best human hits

GAPVD1; RABGEF1; RIN3

Species

B.schlosseri

Unique Gene ID

Boschl.g00002450

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g02450

Location

chrUn:16012101..16013187

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g02450.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
VPS9_dom_sf Gene3D VPS9 domain superfamily
VPS9 SMART VPS9 domain
VPS9 Pfam VPS9 domain
VPS9_dom_sf SUPERFAMILY VPS9 domain superfamily
VPS9 ProSiteProfiles VPS9 domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
DNA binding Hs molecular function
protein binding Hs molecular function
nucleolus Hs cellular component
cytoplasm Hs cellular component
endosome Hs cellular component
early endosome Hs cellular component
cytosol Hs cellular component
protein targeting to membrane Hs biological process
endocytosis Hs biological process
zinc ion binding Hs molecular function
protein transport Hs biological process
Rab guanyl-nucleotide exchange factor activity Hs molecular function
Rab GTPase binding Hs molecular function
early endosome membrane Hs cellular component
metal ion binding Hs molecular function
recycling endosome Hs cellular component
regulation of molecular function Hs biological process

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
DNA binding Hs molecular function 295 4.02e-96
guanyl-nucleotide exchange factor activity Hs molecular function 100 5.18e-23
GTPase activator activity Hs molecular function 100 5.18e-23
protein binding Hs molecular function 295 4.02e-96
nucleolus Hs cellular component 295 4.02e-96
cytoplasm Hs cellular component 295 4.02e-96
endosome Hs cellular component 295 4.02e-96
early endosome Hs cellular component 295 4.02e-96
cytosol Hs cellular component 295 4.02e-96
zinc ion binding Hs molecular function 295 4.02e-96
membrane Hs cellular component 100 5.18e-23
Rab guanyl-nucleotide exchange factor activity Hs molecular function 295 4.02e-96
Rab GTPase binding Hs molecular function 295 4.02e-96
cytoplasmic vesicle Hs cellular component 56.2 1.52e-08
early endosome membrane Hs cellular component 295 4.02e-96
GTPase activating protein binding Hs molecular function 100 5.18e-23
cadherin binding Hs molecular function 100 5.18e-23
metal ion binding Hs molecular function 295 4.02e-96
recycling endosome Hs cellular component 295 4.02e-96

GO (InterProScan)

No result

GO Term Analysis Type e-value