Aniseed - Gene card

Gene Card

Best human hits

POU4F1; POU4F2; POU4F3

Species

B.schlosseri

Unique Gene ID

Boschl.g00003889

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g03889

Location

chrUn:25191516..25192681

Transcript Models and Sequences

Boschl.CG.Botznik2013.chrUn.g03889.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term	Analysis	Definition
POU	PRINTS	POU domain
Homeobox_dom	ProSiteProfiles	Homeobox domain
Homeobox-like_sf	SUPERFAMILY	Homeobox-like domain superfamily
POU_dom	Pfam	POU-specific domain
POU_dom	ProSiteProfiles	POU-specific domain
Homeobox_dom	SMART	Homeobox domain
POU_dom	SMART	POU-specific domain
Homeobox_dom	Pfam	Homeobox domain
Homeobox_CS	ProSitePatterns	Homeobox, conserved site
Homeobox_dom	CDD	Homeobox domain

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

25 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nuclear chromatin	Hs	cellular component	179	2.78e-55
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	182	6.67e-57
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function	179	2.78e-55
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	182	6.67e-57
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	182	6.67e-57
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	182	6.67e-57
transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding	Hs	molecular function	179	2.78e-55
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	179	1.49e-56
DNA binding	Hs	molecular function	182	6.67e-57
chromatin binding	Hs	molecular function	182	6.67e-57
single-stranded DNA binding	Hs	molecular function	179	2.78e-55
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	182	6.67e-57
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding	Hs	molecular function	179	2.78e-55
transcription coactivator activity	Hs	molecular function	182	6.67e-57
transcription corepressor activity	Hs	molecular function	182	6.67e-57
nucleus	Hs	cellular component	182	6.67e-57
nucleoplasm	Hs	cellular component	182	6.67e-57
cytoplasm	Hs	cellular component	182	6.67e-57
plasma membrane	Hs	cellular component	182	6.67e-57
membrane	Hs	cellular component	182	6.67e-57
nuclear speck	Hs	cellular component	182	6.67e-57
neuron projection	Hs	cellular component	179	2.78e-55
sequence-specific DNA binding	Hs	molecular function	182	6.67e-57
GTPase binding	Hs	molecular function	179	2.78e-55
promoter-specific chromatin binding	Hs	molecular function	182	6.67e-57

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
DNA binding	PRINTS	molecular function	2.0E-19
transcription factor activity, sequence-specific DNA binding	Pfam	molecular function	1.2E-7
regulation of transcription, DNA-templated	Pfam	biological process	1.2E-7
sequence-specific DNA binding	ProSitePatterns	molecular function