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Gene Card

Best human hits

DDX3X; DDX3Y; DDX4

Species

B.schlosseri

Unique Gene ID

Boschl.g00004867

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g04867

Location

chrUn:32086565..32087670

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g04867.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Helicase_C CDD Helicase, C-terminal
Helicase_ATP-bd ProSiteProfiles Helicase superfamily 1/2, ATP-binding domain
Helicase_C ProSiteProfiles Helicase, C-terminal
Helicase_ATP-bd SMART Helicase superfamily 1/2, ATP-binding domain
DEAD/DEAH_box_helicase_dom Pfam DEAD/DEAH box helicase domain
RNA-helicase_DEAD-box_CS ProSitePatterns ATP-dependent RNA helicase DEAD-box, conserved site
Helicase_C Pfam Helicase, C-terminal
RNA_helicase_DEAD_Q_motif ProSiteProfiles RNA helicase, DEAD-box type, Q motif

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

44 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 409 5.80e-138
nucleic acid binding Hs molecular function 409 5.80e-138
DNA binding Hs molecular function 352 7.87e-116
RNA binding Hs molecular function 352 7.87e-116
GTPase activity Hs molecular function 352 7.87e-116
ATP-dependent DNA helicase activity Hs molecular function 352 7.87e-116
ATP-dependent RNA helicase activity Hs molecular function 409 5.80e-138
helicase activity Hs molecular function 409 5.80e-138
protein binding Hs molecular function 352 7.87e-116
ATP binding Hs molecular function 409 5.80e-138
extracellular region Hs cellular component 352 7.87e-116
nucleus Hs cellular component 352 7.87e-116
nucleolus Hs cellular component 409 5.80e-138
cytoplasm Hs cellular component 409 5.80e-138
mitochondrion Hs cellular component 352 7.87e-116
mitochondrial outer membrane Hs cellular component 352 7.87e-116
cytosol Hs cellular component 352 7.87e-116
eukaryotic translation initiation factor 3 complex Hs cellular component 352 7.87e-116
transcription factor binding Hs molecular function 352 7.87e-116
poly(A) binding Hs molecular function 352 7.87e-116
eukaryotic initiation factor 4E binding Hs molecular function 352 7.87e-116
cytoplasmic stress granule Hs cellular component 352 7.87e-116
membrane Hs cellular component 352 7.87e-116
nuclear speck Hs cellular component 352 7.87e-116
hydrolase activity Hs molecular function 409 5.80e-138
ATPase activity Hs molecular function 409 5.80e-138
nucleoside-triphosphatase activity Hs molecular function 352 7.87e-116
cytosolic small ribosomal subunit Hs cellular component 352 7.87e-116
translation initiation factor binding Hs molecular function 352 7.87e-116
RNA strand annealing activity Hs molecular function 352 7.87e-116
secretory granule lumen Hs cellular component 352 7.87e-116
RNA stem-loop binding Hs molecular function 352 7.87e-116
cytoplasmic ribonucleoprotein granule Hs cellular component 343 2.98e-113
ribosomal small subunit binding Hs molecular function 352 7.87e-116
P granule Hs cellular component 409 5.80e-138
CTPase activity Hs molecular function 352 7.87e-116
protein serine/threonine kinase activator activity Hs molecular function 352 7.87e-116
cadherin binding Hs molecular function 352 7.87e-116
mRNA 5'-UTR binding Hs molecular function 352 7.87e-116
perinuclear region of cytoplasm Hs cellular component 409 5.80e-138
extracellular exosome Hs cellular component 352 7.87e-116
pi-body Hs cellular component 409 5.80e-138
piP-body Hs cellular component 409 5.80e-138
ficolin-1-rich granule lumen Hs cellular component 352 7.87e-116

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 4.4E-48
ATP binding Pfam molecular function 4.4E-48

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