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GENE CARD

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Gene Card

Best human hits

ALKBH1

Species

B.schlosseri

Unique Gene ID

Boschl.g00008118

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g08118

Location

chrUn:52967202..52970162

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g08118.01.t

External Database Gene Card

External database links

No result

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Genomicus Synteny Browser

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Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Alkb PANTHER Alkylated DNA repair protein AlkB
AlkB-like_sf Gene3D Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
AlkB-like Pfam Alpha-ketoglutarate-dependent dioxygenase AlkB-like

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

39 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
tRNA binding Hs molecular function
neuron migration Hs biological process
tRNA wobble cytosine modification Hs biological process
catalytic activity Hs molecular function
DNA-(apurinic or apyrimidinic site) lyase activity Hs molecular function
nucleus Hs cellular component
nuclear euchromatin Hs cellular component
mitochondrion Hs cellular component
DNA repair Hs biological process
DNA dealkylation involved in DNA repair Hs biological process
regulation of translation Hs biological process
regulation of translational initiation Hs biological process
cellular response to DNA damage stimulus Hs biological process
metabolic process Hs biological process
ferrous iron binding Hs molecular function
regulation of gene expression Hs biological process
oxidoreductase activity Hs molecular function
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors Hs molecular function
lyase activity Hs molecular function
cell differentiation Hs biological process
neuron projection development Hs biological process
oxidative single-stranded DNA demethylation Hs biological process
chemoattractant activity Hs molecular function
RNA repair Hs biological process
negative regulation of neuron apoptotic process Hs biological process
DNA-N1-methyladenine dioxygenase activity Hs molecular function
metal ion binding Hs molecular function
developmental growth Hs biological process
positive chemotaxis Hs biological process
dioxygenase activity Hs molecular function
oxidation-reduction process Hs biological process
regulation of mitochondrial translation Hs biological process
methylcytosine dioxygenase activity Hs molecular function
oxidative demethylation Hs biological process
DNA demethylation Hs biological process
1-ethyladenine demethylase activity Hs molecular function
class I DNA-(apurinic or apyrimidinic site) lyase activity Hs molecular function
class III/IV DNA-(apurinic or apyrimidinic site) lyase activity Hs molecular function
tRNA demethylase activity Hs molecular function

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
tRNA binding Hs molecular function 191 5.40e-58
catalytic activity Hs molecular function 191 5.40e-58
DNA-(apurinic or apyrimidinic site) lyase activity Hs molecular function 191 5.40e-58
nucleus Hs cellular component 191 5.40e-58
nuclear euchromatin Hs cellular component 191 5.40e-58
mitochondrion Hs cellular component 191 5.40e-58
ferrous iron binding Hs molecular function 191 5.40e-58
oxidoreductase activity Hs molecular function 191 5.40e-58
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors Hs molecular function 191 5.40e-58
lyase activity Hs molecular function 191 5.40e-58
chemoattractant activity Hs molecular function 191 5.40e-58
DNA-N1-methyladenine dioxygenase activity Hs molecular function 191 5.40e-58
metal ion binding Hs molecular function 191 5.40e-58
dioxygenase activity Hs molecular function 191 5.40e-58
methylcytosine dioxygenase activity Hs molecular function 191 5.40e-58
1-ethyladenine demethylase activity Hs molecular function 191 5.40e-58
class I DNA-(apurinic or apyrimidinic site) lyase activity Hs molecular function 191 5.40e-58
class III/IV DNA-(apurinic or apyrimidinic site) lyase activity Hs molecular function 191 5.40e-58
tRNA demethylase activity Hs molecular function 191 5.40e-58

GO (InterProScan)

2 results

GO Term Analysis Type e-value
DNA repair PANTHER biological process 8.5E-88
oxidation-reduction process PANTHER biological process 8.5E-88

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