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Gene Card

Best human hits

DDX3X; DDX3Y; DDX41

Species

B.schlosseri

Unique Gene ID

Boschl.g00010155

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g10155

Location

chrUn:65552435..65553892

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g10155.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
Helicase_C Pfam Helicase, C-terminal
Helicase_ATP-bd ProSiteProfiles Helicase superfamily 1/2, ATP-binding domain
Helicase_C ProSiteProfiles Helicase, C-terminal
DEAD/DEAH_box_helicase_dom Pfam DEAD/DEAH box helicase domain
Helicase_C SMART Helicase, C-terminal
Znf_CCHC ProSiteProfiles Zinc finger, CCHC-type
Znf_CCHC_sf SUPERFAMILY Zinc finger, CCHC-type superfamily
Helicase_C CDD Helicase, C-terminal
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Helicase_ATP-bd SMART Helicase superfamily 1/2, ATP-binding domain
RNA_helicase_DEAD_Q_motif ProSiteProfiles RNA helicase, DEAD-box type, Q motif

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

28 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleotide binding Hs molecular function
mRNA splicing, via spliceosome Hs biological process
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
RNA binding Hs molecular function
ATP-dependent RNA helicase activity Hs molecular function
helicase activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleus Hs cellular component
spliceosomal complex Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
endoplasmic reticulum Hs cellular component
cytosol Hs cellular component
mRNA processing Hs biological process
apoptotic process Hs biological process
cell proliferation Hs biological process
RNA splicing Hs biological process
RNA secondary structure unwinding Hs biological process
membrane Hs cellular component
hydrolase activity Hs molecular function
cell differentiation Hs biological process
positive regulation of type I interferon production Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
metal ion binding Hs molecular function
defense response to virus Hs biological process
catalytic step 2 spliceosome Hs cellular component

GO (Blast)

44 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 751 0.0
nucleic acid binding Hs molecular function 751 0.0
DNA binding Hs molecular function 751 0.0
RNA binding Hs molecular function 751 0.0
GTPase activity Hs molecular function 291 1.36e-90
ATP-dependent DNA helicase activity Hs molecular function 291 1.36e-90
ATP-dependent RNA helicase activity Hs molecular function 751 0.0
helicase activity Hs molecular function 751 0.0
protein binding Hs molecular function 751 0.0
ATP binding Hs molecular function 751 0.0
extracellular region Hs cellular component 291 1.36e-90
nucleus Hs cellular component 751 0.0
spliceosomal complex Hs cellular component 751 0.0
nucleolus Hs cellular component 751 0.0
cytoplasm Hs cellular component 751 0.0
mitochondrion Hs cellular component 291 1.36e-90
mitochondrial outer membrane Hs cellular component 291 1.36e-90
endoplasmic reticulum Hs cellular component 751 0.0
cytosol Hs cellular component 751 0.0
eukaryotic translation initiation factor 3 complex Hs cellular component 291 1.36e-90
transcription factor binding Hs molecular function 291 1.36e-90
poly(A) binding Hs molecular function 291 1.36e-90
eukaryotic initiation factor 4E binding Hs molecular function 291 1.36e-90
cytoplasmic stress granule Hs cellular component 291 1.36e-90
membrane Hs cellular component 751 0.0
nuclear speck Hs cellular component 291 1.36e-90
hydrolase activity Hs molecular function 751 0.0
ATPase activity Hs molecular function 291 1.36e-90
nucleoside-triphosphatase activity Hs molecular function 291 1.36e-90
cytosolic small ribosomal subunit Hs cellular component 291 1.36e-90
translation initiation factor binding Hs molecular function 291 1.36e-90
RNA strand annealing activity Hs molecular function 291 1.36e-90
secretory granule lumen Hs cellular component 291 1.36e-90
RNA stem-loop binding Hs molecular function 291 1.36e-90
cytoplasmic ribonucleoprotein granule Hs cellular component 290 3.99e-91
ribosomal small subunit binding Hs molecular function 291 1.36e-90
CTPase activity Hs molecular function 291 1.36e-90
protein serine/threonine kinase activator activity Hs molecular function 291 1.36e-90
cadherin binding Hs molecular function 291 1.36e-90
metal ion binding Hs molecular function 751 0.0
mRNA 5'-UTR binding Hs molecular function 291 1.36e-90
extracellular exosome Hs cellular component 291 1.36e-90
catalytic step 2 spliceosome Hs cellular component 751 0.0
ficolin-1-rich granule lumen Hs cellular component 291 1.36e-90

GO (InterProScan)

3 results

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 2.3E-44
ATP binding Pfam molecular function 2.3E-44
zinc ion binding SUPERFAMILY molecular function 3.92E-5

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