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GENE CARD

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Gene Card

Best human hits

CTCF; CTCFL; ZNF852

Species

B.schlosseri

Unique Gene ID

Boschl.g00013901

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g13901

Location

chrUn:89497396..89498770

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g13901.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type SMART Zinc finger C2H2-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

25 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
chromosome, centromeric region Hs cellular component 318 2.17e-101
condensed chromosome Hs cellular component 318 2.17e-101
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 318 2.17e-101
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 318 2.17e-101
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 310 1.66e-98
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 318 2.17e-101
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 318 2.17e-101
nucleic acid binding Hs molecular function 318 2.17e-101
DNA binding Hs molecular function 318 2.17e-101
chromatin binding Hs molecular function 318 2.17e-101
transcription factor activity, sequence-specific DNA binding Hs molecular function 318 2.17e-101
transcription corepressor activity Hs molecular function 318 2.17e-101
protein binding Hs molecular function 318 2.17e-101
intracellular Hs cellular component 176 1.97e-49
nucleus Hs cellular component 318 2.17e-101
nucleoplasm Hs cellular component 318 2.17e-101
chromosome Hs cellular component 318 2.17e-101
nucleolus Hs cellular component 318 2.17e-101
cytoplasm Hs cellular component 310 1.66e-98
zinc ion binding Hs molecular function 318 2.17e-101
histone binding Hs molecular function 310 1.66e-98
chromatin insulator sequence binding Hs molecular function 318 2.17e-101
sequence-specific DNA binding Hs molecular function 318 2.17e-101
transcription regulatory region DNA binding Hs molecular function 318 2.17e-101
metal ion binding Hs molecular function 318 2.17e-101

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 0.001