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GENE CARD

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Gene Card

Best human hits

SNX18; SNX33; SNX9

Species

B.schlosseri

Unique Gene ID

Boschl.g00014047

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g14047

Location

chrUn:90601373..90604440

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g14047.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

12 results

IPR Term Analysis Definition
SH3_domain SMART SH3 domain
PX_dom_sf SUPERFAMILY PX domain superfamily
Phox Pfam Phox homologous domain
SH3_domain Pfam SH3 domain
SH3-like_dom_sf SUPERFAMILY SH3-like domain superfamily
PX_dom_sf Gene3D PX domain superfamily
Phox ProSiteProfiles Phox homologous domain
SH3_domain ProSiteProfiles SH3 domain
AH/BAR_dom_sf Gene3D AH/BAR domain superfamily
Phox SMART Phox homologous domain
SNX9 PANTHER Sorting nexin-9
Sorting_nexin_WASP-bd-dom Pfam Sorting nexin protein, WASP-binding domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

28 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
ruffle Hs cellular component 332 1.08e-106
protein binding Hs molecular function 332 1.08e-106
1-phosphatidylinositol binding Hs molecular function 332 1.08e-106
phosphatidylinositol-4,5-bisphosphate binding Hs molecular function 261 1.57e-79
intracellular Hs cellular component 327 2.60e-105
cytoplasm Hs cellular component 332 1.08e-106
endosome Hs cellular component 261 1.57e-79
Golgi apparatus Hs cellular component 332 1.08e-106
trans-Golgi network Hs cellular component 332 1.08e-106
cytosol Hs cellular component 332 1.08e-106
plasma membrane Hs cellular component 332 1.08e-106
lipid binding Hs molecular function 332 1.08e-106
endosome membrane Hs cellular component 261 1.57e-79
endomembrane system Hs cellular component 261 1.57e-79
membrane Hs cellular component 332 1.08e-106
extrinsic component of membrane Hs cellular component 327 2.60e-105
clathrin-coated vesicle Hs cellular component 332 1.08e-106
cytoplasmic vesicle membrane Hs cellular component 332 1.08e-106
extrinsic component of cytoplasmic side of plasma membrane Hs cellular component 332 1.08e-106
cytoplasmic vesicle Hs cellular component 332 1.08e-106
ubiquitin protein ligase binding Hs molecular function 332 1.08e-106
phosphatidylinositol binding Hs molecular function 332 1.08e-106
identical protein binding Hs molecular function 332 1.08e-106
protein homodimerization activity Hs molecular function 332 1.08e-106
cell projection Hs cellular component 332 1.08e-106
cadherin binding Hs molecular function 332 1.08e-106
extracellular exosome Hs cellular component 332 1.08e-106
Arp2/3 complex binding Hs molecular function 332 1.08e-106

GO (InterProScan)

5 results

GO Term Analysis Type e-value
mitotic cytokinesis PANTHER biological process 1.0E-121
protein binding SUPERFAMILY molecular function 1.44E-12
intracellular protein transport PANTHER biological process 1.0E-121
endocytosis PANTHER biological process 1.0E-121
phosphatidylinositol binding PANTHER molecular function 1.0E-121