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GENE CARD

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Gene Card

Best human hits

SND1

Species

B.schlosseri

Unique Gene ID

Boschl.g00019442

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g19442

Location

chrUn:126219705..126224201

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g19442.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
SNase_OB-fold_sf Gene3D SNase-like, OB-fold superfamily
Staphylococal_nuclease_OB-fold SMART Staphylococcal nuclease (SNase-like), OB-fold
Staphylococal_nuclease_OB-fold Pfam Staphylococcal nuclease (SNase-like), OB-fold

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleic acid binding Hs molecular function 120 3.40e-32
transcription cofactor activity Hs molecular function 120 3.40e-32
RNA binding Hs molecular function 120 3.40e-32
nuclease activity Hs molecular function 120 3.40e-32
protein binding Hs molecular function 120 3.40e-32
nucleus Hs cellular component 120 3.40e-32
cytoplasm Hs cellular component 120 3.40e-32
mitochondrion Hs cellular component 120 3.40e-32
cytosol Hs cellular component 120 3.40e-32
membrane Hs cellular component 120 3.40e-32
RISC complex Hs cellular component 120 3.40e-32
melanosome Hs cellular component 120 3.40e-32
cadherin binding Hs molecular function 120 3.40e-32
extracellular exosome Hs cellular component 120 3.40e-32
dense body Hs cellular component 120 3.40e-32

GO (InterProScan)

No result

GO Term Analysis Type e-value