Aniseed - Gene card

Gene Card

Best human hits

HDAC4; HDAC5; HDAC9

Species

B.schlosseri

Unique Gene ID

Boschl.g00020158

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g20158

Location

chrUn:130932239..130939017

Transcript Models and Sequences

Boschl.CG.Botznik2013.chrUn.g20158.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
His_deacetylse_dom_sf	Gene3D	Histone deacetylase domain superfamily
Ureohydrolase_dom_sf	SUPERFAMILY	Ureohydrolase domain superfamily
His_deacetylse	PANTHER	Histone deacetylase superfamily

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

86 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
histone deacetylase complex	Hs	cellular component
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
core promoter binding	Hs	molecular function
RNA polymerase II transcription factor binding	Hs	molecular function
skeletal system development	Hs	biological process
response to amphetamine	Hs	biological process
osteoblast development	Hs	biological process
DNA binding	Hs	molecular function
chromatin binding	Hs	molecular function
transcription corepressor activity	Hs	molecular function
histone deacetylase activity	Hs	molecular function
protein kinase C binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
transcription factor complex	Hs	cellular component
cytoplasm	Hs	cellular component
Golgi apparatus	Hs	cellular component
cytosol	Hs	cellular component
chromatin organization	Hs	biological process
chromatin remodeling	Hs	biological process
chromatin silencing	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
protein deacetylation	Hs	biological process
inflammatory response	Hs	biological process
nervous system development	Hs	biological process
heart development	Hs	biological process
transcription factor binding	Hs	molecular function
zinc ion binding	Hs	molecular function
positive regulation of cell proliferation	Hs	biological process
negative regulation of cell proliferation	Hs	biological process
positive regulation of lamellipodium assembly	Hs	biological process
regulation of myotube differentiation	Hs	biological process
regulation of cardiac muscle contraction by calcium ion signaling	Hs	biological process
response to activity	Hs	biological process
histone deacetylation	Hs	biological process
nuclear speck	Hs	cellular component
hydrolase activity	Hs	molecular function
transcriptional repressor complex	Hs	cellular component
protein kinase binding	Hs	molecular function
sarcomere	Hs	cellular component
Z disc	Hs	cellular component
neuron differentiation	Hs	biological process
B cell differentiation	Hs	biological process
potassium ion binding	Hs	molecular function
neuromuscular junction	Hs	cellular component
A band	Hs	cellular component
NAD-dependent histone deacetylase activity (H3-K14 specific)	Hs	molecular function
cellular response to insulin stimulus	Hs	biological process
protein deacetylase activity	Hs	molecular function
activating transcription factor binding	Hs	molecular function
histone methyltransferase complex	Hs	cellular component
regulation of gene expression, epigenetic	Hs	biological process
B cell activation	Hs	biological process
response to cocaine	Hs	biological process
response to drug	Hs	biological process
actomyosin	Hs	cellular component
identical protein binding	Hs	molecular function
histone deacetylase binding	Hs	molecular function
regulation of protein binding	Hs	biological process
negative regulation of sequence-specific DNA binding transcription factor activity	Hs	biological process
positive regulation of neuron apoptotic process	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
transcription regulatory region DNA binding	Hs	molecular function
negative regulation of osteoblast differentiation	Hs	biological process
negative regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
metal ion binding	Hs	molecular function
regulation of skeletal muscle fiber development	Hs	biological process
positive regulation of sequence-specific DNA binding transcription factor activity	Hs	biological process
repressing transcription factor binding	Hs	molecular function
histone H3 deacetylation	Hs	biological process
cellular response to lipopolysaccharide	Hs	biological process
cellular response to mechanical stimulus	Hs	biological process
cellular response to tumor necrosis factor	Hs	biological process
positive regulation of cell migration involved in sprouting angiogenesis	Hs	biological process
negative regulation of pri-miRNA transcription from RNA polymerase II promoter	Hs	biological process
promoter-specific chromatin binding	Hs	molecular function
vasculogenesis	Hs	biological process
cell-cell junction assembly	Hs	biological process
protein sumoylation	Hs	biological process
SUMO transferase activity	Hs	molecular function
14-3-3 protein binding	Hs	molecular function
negative regulation of NIK/NF-kappaB signaling	Hs	biological process

GO (Blast)

38 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
histone deacetylase complex	Hs	cellular component	112	3.22e-26
core promoter binding	Hs	molecular function	112	3.22e-26
RNA polymerase II transcription factor binding	Hs	molecular function	112	3.22e-26
DNA binding	Hs	molecular function	112	3.22e-26
chromatin binding	Hs	molecular function	112	3.22e-26
transcription corepressor activity	Hs	molecular function	112	3.22e-26
histone deacetylase activity	Hs	molecular function	112	3.22e-26
protein kinase C binding	Hs	molecular function	103	2.98e-23
protein binding	Hs	molecular function	112	3.22e-26
nucleus	Hs	cellular component	112	3.22e-26
nucleoplasm	Hs	cellular component	112	3.22e-26
transcription factor complex	Hs	cellular component	103	2.98e-23
cytoplasm	Hs	cellular component	112	3.22e-26
Golgi apparatus	Hs	cellular component	100	1.81e-22
cytosol	Hs	cellular component	112	3.22e-26
transcription factor binding	Hs	molecular function	112	3.22e-26
zinc ion binding	Hs	molecular function	112	3.22e-26
nuclear speck	Hs	cellular component	100	1.81e-22
hydrolase activity	Hs	molecular function	112	3.22e-26
transcriptional repressor complex	Hs	cellular component	112	3.22e-26
protein kinase binding	Hs	molecular function	112	3.22e-26
sarcomere	Hs	cellular component	112	3.22e-26
Z disc	Hs	cellular component	112	3.22e-26
potassium ion binding	Hs	molecular function	112	3.22e-26
neuromuscular junction	Hs	cellular component	112	3.22e-26
A band	Hs	cellular component	112	3.22e-26
NAD-dependent histone deacetylase activity (H3-K14 specific)	Hs	molecular function	112	3.22e-26
protein deacetylase activity	Hs	molecular function	112	3.22e-26
activating transcription factor binding	Hs	molecular function	112	3.22e-26
histone methyltransferase complex	Hs	cellular component	103	2.98e-23
actomyosin	Hs	cellular component	112	3.22e-26
identical protein binding	Hs	molecular function	112	3.22e-26
histone deacetylase binding	Hs	molecular function	112	3.22e-26
sequence-specific DNA binding	Hs	molecular function	112	3.22e-26
transcription regulatory region DNA binding	Hs	molecular function	112	3.22e-26
metal ion binding	Hs	molecular function	112	3.22e-26
repressing transcription factor binding	Hs	molecular function	112	3.22e-26
promoter-specific chromatin binding	Hs	molecular function	112	3.22e-26

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value