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GENE CARD

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Gene Card

Best human hits

HDAC4; HDAC5; HDAC9

Species

B.schlosseri

Unique Gene ID

Boschl.g00020158

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g20158

Location

chrUn:130932239..130939017

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g20158.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
His_deacetylse_dom_sf Gene3D Histone deacetylase domain superfamily
Ureohydrolase_dom_sf SUPERFAMILY Ureohydrolase domain superfamily
His_deacetylse PANTHER Histone deacetylase superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

86 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
histone deacetylase complex Hs cellular component
negative regulation of transcription from RNA polymerase II promoter Hs biological process
core promoter binding Hs molecular function
RNA polymerase II transcription factor binding Hs molecular function
skeletal system development Hs biological process
response to amphetamine Hs biological process
osteoblast development Hs biological process
DNA binding Hs molecular function
chromatin binding Hs molecular function
transcription corepressor activity Hs molecular function
histone deacetylase activity Hs molecular function
protein kinase C binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
transcription factor complex Hs cellular component
cytoplasm Hs cellular component
Golgi apparatus Hs cellular component
cytosol Hs cellular component
chromatin organization Hs biological process
chromatin remodeling Hs biological process
chromatin silencing Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
protein deacetylation Hs biological process
inflammatory response Hs biological process
nervous system development Hs biological process
heart development Hs biological process
transcription factor binding Hs molecular function
zinc ion binding Hs molecular function
positive regulation of cell proliferation Hs biological process
negative regulation of cell proliferation Hs biological process
positive regulation of lamellipodium assembly Hs biological process
regulation of myotube differentiation Hs biological process
regulation of cardiac muscle contraction by calcium ion signaling Hs biological process
response to activity Hs biological process
histone deacetylation Hs biological process
nuclear speck Hs cellular component
hydrolase activity Hs molecular function
transcriptional repressor complex Hs cellular component
protein kinase binding Hs molecular function
sarcomere Hs cellular component
Z disc Hs cellular component
neuron differentiation Hs biological process
B cell differentiation Hs biological process
potassium ion binding Hs molecular function
neuromuscular junction Hs cellular component
A band Hs cellular component
NAD-dependent histone deacetylase activity (H3-K14 specific) Hs molecular function
cellular response to insulin stimulus Hs biological process
protein deacetylase activity Hs molecular function
activating transcription factor binding Hs molecular function
histone methyltransferase complex Hs cellular component
regulation of gene expression, epigenetic Hs biological process
B cell activation Hs biological process
response to cocaine Hs biological process
response to drug Hs biological process
actomyosin Hs cellular component
identical protein binding Hs molecular function
histone deacetylase binding Hs molecular function
regulation of protein binding Hs biological process
negative regulation of sequence-specific DNA binding transcription factor activity Hs biological process
positive regulation of neuron apoptotic process Hs biological process
sequence-specific DNA binding Hs molecular function
transcription regulatory region DNA binding Hs molecular function
negative regulation of osteoblast differentiation Hs biological process
negative regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
metal ion binding Hs molecular function
regulation of skeletal muscle fiber development Hs biological process
positive regulation of sequence-specific DNA binding transcription factor activity Hs biological process
repressing transcription factor binding Hs molecular function
histone H3 deacetylation Hs biological process
cellular response to lipopolysaccharide Hs biological process
cellular response to mechanical stimulus Hs biological process
cellular response to tumor necrosis factor Hs biological process
positive regulation of cell migration involved in sprouting angiogenesis Hs biological process
negative regulation of pri-miRNA transcription from RNA polymerase II promoter Hs biological process
promoter-specific chromatin binding Hs molecular function
vasculogenesis Hs biological process
cell-cell junction assembly Hs biological process
protein sumoylation Hs biological process
SUMO transferase activity Hs molecular function
14-3-3 protein binding Hs molecular function
negative regulation of NIK/NF-kappaB signaling Hs biological process

GO (Blast)

38 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
histone deacetylase complex Hs cellular component 112 3.22e-26
core promoter binding Hs molecular function 112 3.22e-26
RNA polymerase II transcription factor binding Hs molecular function 112 3.22e-26
DNA binding Hs molecular function 112 3.22e-26
chromatin binding Hs molecular function 112 3.22e-26
transcription corepressor activity Hs molecular function 112 3.22e-26
histone deacetylase activity Hs molecular function 112 3.22e-26
protein kinase C binding Hs molecular function 103 2.98e-23
protein binding Hs molecular function 112 3.22e-26
nucleus Hs cellular component 112 3.22e-26
nucleoplasm Hs cellular component 112 3.22e-26
transcription factor complex Hs cellular component 103 2.98e-23
cytoplasm Hs cellular component 112 3.22e-26
Golgi apparatus Hs cellular component 100 1.81e-22
cytosol Hs cellular component 112 3.22e-26
transcription factor binding Hs molecular function 112 3.22e-26
zinc ion binding Hs molecular function 112 3.22e-26
nuclear speck Hs cellular component 100 1.81e-22
hydrolase activity Hs molecular function 112 3.22e-26
transcriptional repressor complex Hs cellular component 112 3.22e-26
protein kinase binding Hs molecular function 112 3.22e-26
sarcomere Hs cellular component 112 3.22e-26
Z disc Hs cellular component 112 3.22e-26
potassium ion binding Hs molecular function 112 3.22e-26
neuromuscular junction Hs cellular component 112 3.22e-26
A band Hs cellular component 112 3.22e-26
NAD-dependent histone deacetylase activity (H3-K14 specific) Hs molecular function 112 3.22e-26
protein deacetylase activity Hs molecular function 112 3.22e-26
activating transcription factor binding Hs molecular function 112 3.22e-26
histone methyltransferase complex Hs cellular component 103 2.98e-23
actomyosin Hs cellular component 112 3.22e-26
identical protein binding Hs molecular function 112 3.22e-26
histone deacetylase binding Hs molecular function 112 3.22e-26
sequence-specific DNA binding Hs molecular function 112 3.22e-26
transcription regulatory region DNA binding Hs molecular function 112 3.22e-26
metal ion binding Hs molecular function 112 3.22e-26
repressing transcription factor binding Hs molecular function 112 3.22e-26
promoter-specific chromatin binding Hs molecular function 112 3.22e-26

GO (InterProScan)

No result

GO Term Analysis Type e-value