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GENE CARD

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Gene Card

Best human hits

DES; GFAP; VIM

Species

B.schlosseri

Unique Gene ID

Boschl.g00021989

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g21989

Location

chrUn:143217380..143218857

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g21989.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
IF Pfam Intermediate filament protein
IF PANTHER Intermediate filament protein

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

103 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
double-stranded RNA binding Hs molecular function
integrin binding Hs molecular function
structural molecule activity Hs molecular function
structural constituent of cytoskeleton Hs molecular function
structural constituent of eye lens Hs molecular function
protein binding Hs molecular function
intracellular Hs cellular component
nucleus Hs cellular component
cytoplasm Hs cellular component
lysosome Hs cellular component
peroxisome Hs cellular component
cytosol Hs cellular component
polysome Hs cellular component
cytoskeleton Hs cellular component
intermediate filament Hs cellular component
neurofilament Hs cellular component
plasma membrane Hs cellular component
cell-cell junction Hs cellular component
fascia adherens Hs cellular component
focal adhesion Hs cellular component
muscle contraction Hs biological process
cytoskeleton organization Hs biological process
regulation of heart contraction Hs biological process
protein C-terminus binding Hs molecular function
cytoskeletal protein binding Hs molecular function
response to wounding Hs biological process
positive regulation of gene expression Hs biological process
negative regulation of neuron projection development Hs biological process
astrocyte development Hs biological process
intercalated disc Hs cellular component
membrane Hs cellular component
viral process Hs biological process
cytokine-mediated signaling pathway Hs biological process
kinase binding Hs molecular function
protein domain specific binding Hs molecular function
Z disc Hs cellular component
extracellular matrix organization Hs biological process
intracellular ribonucleoprotein complex Hs cellular component
neuron projection regeneration Hs biological process
cell leading edge Hs cellular component
neuromuscular junction Hs cellular component
sarcolemma Hs cellular component
identical protein binding Hs molecular function
cell projection Hs cellular component
neuron projection Hs cellular component
myelin sheath Hs cellular component
contractile fiber Hs cellular component
regulation of mRNA stability Hs biological process
cell body Hs cellular component
intermediate filament organization Hs biological process
intermediate filament cytoskeleton Hs cellular component
phagocytic vesicle Hs cellular component
positive regulation of translation Hs biological process
positive regulation of glial cell proliferation Hs biological process
long-term synaptic potentiation Hs biological process
SMAD protein signal transduction Hs biological process
axon development Hs biological process
extracellular exosome Hs cellular component
cellular response to interferon-gamma Hs biological process
scaffold protein binding Hs molecular function
glial cell projection Hs cellular component
astrocyte projection Hs cellular component
astrocyte end-foot Hs cellular component
cardiac myofibril Hs cellular component
cytoplasmic side of lysosomal membrane Hs cellular component
keratin filament binding Hs molecular function
MAPK cascade Hs biological process
microtubule cytoskeleton organization Hs biological process
Ras guanyl-nucleotide exchange factor activity Hs molecular function
extracellular space Hs cellular component
nucleoplasm Hs cellular component
multicellular organism development Hs biological process
nervous system development Hs biological process
microtubule binding Hs molecular function
anterograde axonal transport Hs biological process
retrograde axonal transport Hs biological process
response to toxic substance Hs biological process
response to organic substance Hs biological process
axonal transport of mitochondrion Hs biological process
spinal cord development Hs biological process
cerebral cortex development Hs biological process
cell differentiation Hs biological process
axon Hs cellular component
growth cone Hs cellular component
protein binding, bridging Hs molecular function
nuclear membrane Hs cellular component
TSC1-TSC2 complex Hs cellular component
cytoplasmic ribonucleoprotein granule Hs cellular component
locomotion Hs biological process
phospholipase binding Hs molecular function
response to peptide hormone Hs biological process
negative regulation of neuron apoptotic process Hs biological process
type III intermediate filament Hs cellular component
intermediate filament cytoskeleton organization Hs biological process
protein heterodimerization activity Hs molecular function
neuron projection morphogenesis Hs biological process
positive regulation of axonogenesis Hs biological process
neuromuscular process controlling balance Hs biological process
protein polymerization Hs biological process
neurofilament cytoskeleton organization Hs biological process
regulation of molecular function Hs biological process
neurofibrillary tangle Hs cellular component
axon cytoplasm Hs cellular component

GO (Blast)

47 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
double-stranded RNA binding Hs molecular function 126 3.42e-34
integrin binding Hs molecular function 99.4 2.06e-24
structural molecule activity Hs molecular function 126 3.42e-34
structural constituent of cytoskeleton Hs molecular function 126 3.42e-34
structural constituent of eye lens Hs molecular function 126 3.42e-34
protein binding Hs molecular function 126 3.42e-34
intracellular Hs cellular component 99.4 2.06e-24
nucleus Hs cellular component 90.5 3.43e-21
cytoplasm Hs cellular component 126 3.42e-34
lysosome Hs cellular component 99.4 2.06e-24
peroxisome Hs cellular component 126 3.42e-34
cytosol Hs cellular component 126 3.42e-34
polysome Hs cellular component 126 3.42e-34
cytoskeleton Hs cellular component 126 3.42e-34
intermediate filament Hs cellular component 126 3.42e-34
neurofilament Hs cellular component 99.4 2.06e-24
plasma membrane Hs cellular component 126 3.42e-34
cell-cell junction Hs cellular component 90.5 3.43e-21
fascia adherens Hs cellular component 90.5 3.43e-21
focal adhesion Hs cellular component 126 3.42e-34
protein C-terminus binding Hs molecular function 126 3.42e-34
cytoskeletal protein binding Hs molecular function 90.5 3.43e-21
intercalated disc Hs cellular component 90.5 3.43e-21
membrane Hs cellular component 99.4 2.06e-24
kinase binding Hs molecular function 99.4 2.06e-24
protein domain specific binding Hs molecular function 126 3.42e-34
Z disc Hs cellular component 90.5 3.43e-21
intracellular ribonucleoprotein complex Hs cellular component 126 3.42e-34
cell leading edge Hs cellular component 126 3.42e-34
neuromuscular junction Hs cellular component 90.5 3.43e-21
sarcolemma Hs cellular component 90.5 3.43e-21
identical protein binding Hs molecular function 126 3.42e-34
cell projection Hs cellular component 126 3.42e-34
neuron projection Hs cellular component 126 3.42e-34
myelin sheath Hs cellular component 99.4 2.06e-24
contractile fiber Hs cellular component 90.5 3.43e-21
cell body Hs cellular component 99.4 2.06e-24
intermediate filament cytoskeleton Hs cellular component 99.4 2.06e-24
phagocytic vesicle Hs cellular component 126 3.42e-34
extracellular exosome Hs cellular component 126 3.42e-34
scaffold protein binding Hs molecular function 126 3.42e-34
glial cell projection Hs cellular component 99.4 2.06e-24
astrocyte projection Hs cellular component 99.4 2.06e-24
astrocyte end-foot Hs cellular component 99.4 2.06e-24
cardiac myofibril Hs cellular component 90.5 3.43e-21
cytoplasmic side of lysosomal membrane Hs cellular component 99.4 2.06e-24
keratin filament binding Hs molecular function 126 3.42e-34

GO (InterProScan)

2 results

GO Term Analysis Type e-value
structural molecule activity PANTHER molecular function 3.4E-39
intermediate filament PANTHER cellular component 3.4E-39