Aniseed - Gene card

Gene Card

Best human hits

DES; GFAP; VIM

Species

B.schlosseri

Unique Gene ID

Boschl.g00021989

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g21989

Location

chrUn:143217380..143218857

Transcript Models and Sequences

Boschl.CG.Botznik2013.chrUn.g21989.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term	Analysis	Definition
IF	Pfam	Intermediate filament protein
IF	PANTHER	Intermediate filament protein

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

103 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
double-stranded RNA binding	Hs	molecular function
integrin binding	Hs	molecular function
structural molecule activity	Hs	molecular function
structural constituent of cytoskeleton	Hs	molecular function
structural constituent of eye lens	Hs	molecular function
protein binding	Hs	molecular function
intracellular	Hs	cellular component
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
lysosome	Hs	cellular component
peroxisome	Hs	cellular component
cytosol	Hs	cellular component
polysome	Hs	cellular component
cytoskeleton	Hs	cellular component
intermediate filament	Hs	cellular component
neurofilament	Hs	cellular component
plasma membrane	Hs	cellular component
cell-cell junction	Hs	cellular component
fascia adherens	Hs	cellular component
focal adhesion	Hs	cellular component
muscle contraction	Hs	biological process
cytoskeleton organization	Hs	biological process
regulation of heart contraction	Hs	biological process
protein C-terminus binding	Hs	molecular function
cytoskeletal protein binding	Hs	molecular function
response to wounding	Hs	biological process
positive regulation of gene expression	Hs	biological process
negative regulation of neuron projection development	Hs	biological process
astrocyte development	Hs	biological process
intercalated disc	Hs	cellular component
membrane	Hs	cellular component
viral process	Hs	biological process
cytokine-mediated signaling pathway	Hs	biological process
kinase binding	Hs	molecular function
protein domain specific binding	Hs	molecular function
Z disc	Hs	cellular component
extracellular matrix organization	Hs	biological process
intracellular ribonucleoprotein complex	Hs	cellular component
neuron projection regeneration	Hs	biological process
cell leading edge	Hs	cellular component
neuromuscular junction	Hs	cellular component
sarcolemma	Hs	cellular component
identical protein binding	Hs	molecular function
cell projection	Hs	cellular component
neuron projection	Hs	cellular component
myelin sheath	Hs	cellular component
contractile fiber	Hs	cellular component
regulation of mRNA stability	Hs	biological process
cell body	Hs	cellular component
intermediate filament organization	Hs	biological process
intermediate filament cytoskeleton	Hs	cellular component
phagocytic vesicle	Hs	cellular component
positive regulation of translation	Hs	biological process
positive regulation of glial cell proliferation	Hs	biological process
long-term synaptic potentiation	Hs	biological process
SMAD protein signal transduction	Hs	biological process
axon development	Hs	biological process
extracellular exosome	Hs	cellular component
cellular response to interferon-gamma	Hs	biological process
scaffold protein binding	Hs	molecular function
glial cell projection	Hs	cellular component
astrocyte projection	Hs	cellular component
astrocyte end-foot	Hs	cellular component
cardiac myofibril	Hs	cellular component
cytoplasmic side of lysosomal membrane	Hs	cellular component
keratin filament binding	Hs	molecular function
MAPK cascade	Hs	biological process
microtubule cytoskeleton organization	Hs	biological process
Ras guanyl-nucleotide exchange factor activity	Hs	molecular function
extracellular space	Hs	cellular component
nucleoplasm	Hs	cellular component
multicellular organism development	Hs	biological process
nervous system development	Hs	biological process
microtubule binding	Hs	molecular function
anterograde axonal transport	Hs	biological process
retrograde axonal transport	Hs	biological process
response to toxic substance	Hs	biological process
response to organic substance	Hs	biological process
axonal transport of mitochondrion	Hs	biological process
spinal cord development	Hs	biological process
cerebral cortex development	Hs	biological process
cell differentiation	Hs	biological process
axon	Hs	cellular component
growth cone	Hs	cellular component
protein binding, bridging	Hs	molecular function
nuclear membrane	Hs	cellular component
TSC1-TSC2 complex	Hs	cellular component
cytoplasmic ribonucleoprotein granule	Hs	cellular component
locomotion	Hs	biological process
phospholipase binding	Hs	molecular function
response to peptide hormone	Hs	biological process
negative regulation of neuron apoptotic process	Hs	biological process
type III intermediate filament	Hs	cellular component
intermediate filament cytoskeleton organization	Hs	biological process
protein heterodimerization activity	Hs	molecular function
neuron projection morphogenesis	Hs	biological process
positive regulation of axonogenesis	Hs	biological process
neuromuscular process controlling balance	Hs	biological process
protein polymerization	Hs	biological process
neurofilament cytoskeleton organization	Hs	biological process
regulation of molecular function	Hs	biological process
neurofibrillary tangle	Hs	cellular component
axon cytoplasm	Hs	cellular component

GO (Blast)

47 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
double-stranded RNA binding	Hs	molecular function	126	3.42e-34
integrin binding	Hs	molecular function	99.4	2.06e-24
structural molecule activity	Hs	molecular function	126	3.42e-34
structural constituent of cytoskeleton	Hs	molecular function	126	3.42e-34
structural constituent of eye lens	Hs	molecular function	126	3.42e-34
protein binding	Hs	molecular function	126	3.42e-34
intracellular	Hs	cellular component	99.4	2.06e-24
nucleus	Hs	cellular component	90.5	3.43e-21
cytoplasm	Hs	cellular component	126	3.42e-34
lysosome	Hs	cellular component	99.4	2.06e-24
peroxisome	Hs	cellular component	126	3.42e-34
cytosol	Hs	cellular component	126	3.42e-34
polysome	Hs	cellular component	126	3.42e-34
cytoskeleton	Hs	cellular component	126	3.42e-34
intermediate filament	Hs	cellular component	126	3.42e-34
neurofilament	Hs	cellular component	99.4	2.06e-24
plasma membrane	Hs	cellular component	126	3.42e-34
cell-cell junction	Hs	cellular component	90.5	3.43e-21
fascia adherens	Hs	cellular component	90.5	3.43e-21
focal adhesion	Hs	cellular component	126	3.42e-34
protein C-terminus binding	Hs	molecular function	126	3.42e-34
cytoskeletal protein binding	Hs	molecular function	90.5	3.43e-21
intercalated disc	Hs	cellular component	90.5	3.43e-21
membrane	Hs	cellular component	99.4	2.06e-24
kinase binding	Hs	molecular function	99.4	2.06e-24
protein domain specific binding	Hs	molecular function	126	3.42e-34
Z disc	Hs	cellular component	90.5	3.43e-21
intracellular ribonucleoprotein complex	Hs	cellular component	126	3.42e-34
cell leading edge	Hs	cellular component	126	3.42e-34
neuromuscular junction	Hs	cellular component	90.5	3.43e-21
sarcolemma	Hs	cellular component	90.5	3.43e-21
identical protein binding	Hs	molecular function	126	3.42e-34
cell projection	Hs	cellular component	126	3.42e-34
neuron projection	Hs	cellular component	126	3.42e-34
myelin sheath	Hs	cellular component	99.4	2.06e-24
contractile fiber	Hs	cellular component	90.5	3.43e-21
cell body	Hs	cellular component	99.4	2.06e-24
intermediate filament cytoskeleton	Hs	cellular component	99.4	2.06e-24
phagocytic vesicle	Hs	cellular component	126	3.42e-34
extracellular exosome	Hs	cellular component	126	3.42e-34
scaffold protein binding	Hs	molecular function	126	3.42e-34
glial cell projection	Hs	cellular component	99.4	2.06e-24
astrocyte projection	Hs	cellular component	99.4	2.06e-24
astrocyte end-foot	Hs	cellular component	99.4	2.06e-24
cardiac myofibril	Hs	cellular component	90.5	3.43e-21
cytoplasmic side of lysosomal membrane	Hs	cellular component	99.4	2.06e-24
keratin filament binding	Hs	molecular function	126	3.42e-34

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
structural molecule activity	PANTHER	molecular function	3.4E-39
intermediate filament	PANTHER	cellular component	3.4E-39