Login
Help

GENE CARD

Submit your Data

  1. Gene 'Boschl.CG.Botznik201...'

Gene Card

Best human hits

RPL19

Species

B.schlosseri

Unique Gene ID

Boschl.g00023994

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g23994

Location

chrUn:156440442..156443946

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g23994.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
Ribosomal_L19/L19e SMART Ribosomal protein L19/L19e
60S_ribosomal_L19/L19e_sf SUPERFAMILY Ribosomal protein L19/L19e superfamily
Ribosomal_L19/L19e Hamap Ribosomal protein L19/L19e
Ribosomal_L19/L19e Pfam Ribosomal protein L19/L19e
Ribosomal_L19/L19e_CS ProSitePatterns Ribosomal protein L19/L19e conserved site
Ribosomal_L19_euka CDD Ribosomal protein L19, eukaryotic
Ribosomal_L19/L19e_dom1 Gene3D Ribosomal protein L19/L19e, domain 1

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay Hs biological process
cytoplasmic translation Hs biological process
RNA binding Hs molecular function
structural constituent of ribosome Hs molecular function
protein binding Hs molecular function
intracellular Hs cellular component
cytosol Hs cellular component
ribosome Hs cellular component
focal adhesion Hs cellular component
rRNA processing Hs biological process
translation Hs biological process
translational initiation Hs biological process
SRP-dependent cotranslational protein targeting to membrane Hs biological process
membrane Hs cellular component
cytosolic large ribosomal subunit Hs cellular component
intracellular ribonucleoprotein complex Hs cellular component
polysomal ribosome Hs cellular component
large ribosomal subunit rRNA binding Hs molecular function
5.8S rRNA binding Hs molecular function

GO (Blast)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 278 1.41e-96
structural constituent of ribosome Hs molecular function 278 1.41e-96
protein binding Hs molecular function 278 1.41e-96
intracellular Hs cellular component 278 1.41e-96
cytosol Hs cellular component 278 1.41e-96
ribosome Hs cellular component 278 1.41e-96
focal adhesion Hs cellular component 278 1.41e-96
membrane Hs cellular component 278 1.41e-96
cytosolic large ribosomal subunit Hs cellular component 278 1.41e-96
intracellular ribonucleoprotein complex Hs cellular component 278 1.41e-96
polysomal ribosome Hs cellular component 278 1.41e-96
large ribosomal subunit rRNA binding Hs molecular function 278 1.41e-96
5.8S rRNA binding Hs molecular function 278 1.41e-96

GO (InterProScan)

5 results

GO Term Analysis Type e-value
structural constituent of ribosome SMART molecular function 5.7E-94
intracellular SMART cellular component 5.7E-94
ribosome SMART cellular component 5.7E-94
translation SMART biological process 5.7E-94
cytosolic large ribosomal subunit CDD cellular component 5.95745E-76