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GENE CARD

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  1. Gene 'Harore.CG.MTP2014.S1...'
  2. Species 'Ciona robusta'

Gene Card

Best human hits

CTDP1; CTDSPL2

Species

B.schlosseri

Unique Gene ID

Boschl.g00026429

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g26429

Location

chrUn:172712305..172713800

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g26429.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
Single_hybrid_motif SUPERFAMILY Single hybrid motif
HAD-like_sf SUPERFAMILY HAD-like superfamily
FCP1_dom SMART FCP1 homology domain
HAD_sf Gene3D HAD superfamily
FCP1_dom Pfam FCP1 homology domain
FCP1_dom ProSiteProfiles FCP1 homology domain
FCP1_euk TIGRFAM FCP1-like phosphatase, phosphatase domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
spindle pole Hs cellular component
TFIIF-class transcription factor binding Hs molecular function
phosphoprotein phosphatase activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
centrosome Hs cellular component
microtubule organizing center Hs cellular component
spindle Hs cellular component
cytoskeleton Hs cellular component
transcription from RNA polymerase II promoter Hs biological process
transcription elongation from RNA polymerase II promoter Hs biological process
protein dephosphorylation Hs biological process
cell cycle Hs biological process
CTD phosphatase activity Hs molecular function
exit from mitosis Hs biological process
DNA-directed RNA polymerase II, holoenzyme Hs cellular component
hydrolase activity Hs molecular function
midbody Hs cellular component
Tat protein binding Hs molecular function
macromolecular complex Hs cellular component
intracellular membrane-bounded organelle Hs cellular component
spindle midzone Hs cellular component
cell division Hs biological process
dephosphorylation of RNA polymerase II C-terminal domain Hs biological process

GO (Blast)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
spindle pole Hs cellular component 343 4.52e-108
TFIIF-class transcription factor binding Hs molecular function 343 4.52e-108
phosphoprotein phosphatase activity Hs molecular function 347 4.55e-111
protein binding Hs molecular function 343 4.52e-108
nucleus Hs cellular component 347 4.55e-111
nucleoplasm Hs cellular component 343 4.52e-108
cytoplasm Hs cellular component 343 4.52e-108
centrosome Hs cellular component 343 4.52e-108
microtubule organizing center Hs cellular component 343 4.52e-108
spindle Hs cellular component 343 4.52e-108
cytoskeleton Hs cellular component 343 4.52e-108
CTD phosphatase activity Hs molecular function 343 4.52e-108
DNA-directed RNA polymerase II, holoenzyme Hs cellular component 343 4.52e-108
hydrolase activity Hs molecular function 343 4.52e-108
phosphatase activity Hs molecular function 57.8 6.79e-09
midbody Hs cellular component 343 4.52e-108
Tat protein binding Hs molecular function 343 4.52e-108
macromolecular complex Hs cellular component 343 4.52e-108
intracellular membrane-bounded organelle Hs cellular component 343 4.52e-108
spindle midzone Hs cellular component 343 4.52e-108

GO (InterProScan)

2 results

GO Term Analysis Type e-value
phosphoprotein phosphatase activity TIGRFAM molecular function 8.0E-48
nucleus TIGRFAM cellular component 8.0E-48