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Gene Card

Best human hits

RAB11A; RAB13; RAB28

Species

B.schlosseri

Unique Gene ID

Boschl.g00030249

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g30249

Location

chrUn:198201235..198204817

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g30249.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
ING_N_histone_binding Pfam Inhibitor of growth protein, N-terminal histone-binding
Small_GTPase Pfam Small GTPase superfamily
Znf_FYVE_PHD SUPERFAMILY Zinc finger, FYVE/PHD-type
ING_N_histone_binding SMART Inhibitor of growth protein, N-terminal histone-binding
Small_GTP-bd_dom TIGRFAM Small GTP-binding protein domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

37 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
protein binding Hs molecular function
Golgi apparatus Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
cell cycle Hs biological process
DNA binding Hs molecular function
chromatin binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
chromatin organization Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
protein import into nucleus Hs biological process
male meiosis I Hs biological process
signal transduction Hs biological process
spermatogenesis Hs biological process
spermatid development Hs biological process
negative regulation of cell proliferation Hs biological process
regulation of cell death Hs biological process
Sin3 complex Hs cellular component
CCAAT-binding factor complex Hs cellular component
negative regulation of cell growth Hs biological process
flagellated sperm motility Hs biological process
positive regulation of transforming growth factor beta receptor signaling pathway Hs biological process
positive regulation of histone deacetylation Hs biological process
methylated histone binding Hs molecular function
phosphatidylinositol binding Hs molecular function
regulation of growth Hs biological process
regulation of apoptotic process Hs biological process
macromolecular complex binding Hs molecular function
positive regulation of transcription, DNA-templated Hs biological process
metal ion binding Hs molecular function
male germ-line stem cell asymmetric division Hs biological process
negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator Hs biological process
regulation of cellular senescence Hs biological process
regulation of response to DNA damage stimulus Hs biological process
negative regulation of apoptotic signaling pathway Hs biological process

GO (Blast)

48 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 279 8.69e-91
spindle pole Hs cellular component 117 7.25e-30
GTPase activity Hs molecular function 279 8.69e-91
protein binding Hs molecular function 117 7.25e-30
GTP binding Hs molecular function 279 8.69e-91
cytoplasm Hs cellular component 279 8.69e-91
mitochondrion Hs cellular component 117 7.25e-30
endosome Hs cellular component 117 7.25e-30
multivesicular body Hs cellular component 117 7.25e-30
Golgi apparatus Hs cellular component 117 7.25e-30
trans-Golgi network Hs cellular component 117 7.25e-30
centrosome Hs cellular component 117 7.25e-30
microtubule organizing center Hs cellular component 117 7.25e-30
kinetochore microtubule Hs cellular component 117 7.25e-30
cytosol Hs cellular component 117 7.25e-30
cytoskeleton Hs cellular component 279 8.69e-91
plasma membrane Hs cellular component 279 8.69e-91
cell-cell junction Hs cellular component 116 6.42e-30
bicellular tight junction Hs cellular component 116 6.42e-30
microtubule binding Hs molecular function 117 7.25e-30
membrane Hs cellular component 279 8.69e-91
lateral plasma membrane Hs cellular component 116 6.42e-30
GDP binding Hs molecular function 279 8.69e-91
syntaxin binding Hs molecular function 117 7.25e-30
lamellipodium Hs cellular component 116 6.42e-30
cell junction Hs cellular component 116 6.42e-30
transport vesicle Hs cellular component 117 7.25e-30
endocytic vesicle Hs cellular component 116 6.42e-30
axon Hs cellular component 117 7.25e-30
cytoplasmic vesicle membrane Hs cellular component 117 7.25e-30
cytoplasmic vesicle Hs cellular component 117 7.25e-30
myosin V binding Hs molecular function 117 7.25e-30
vesicle Hs cellular component 117 7.25e-30
cleavage furrow Hs cellular component 117 7.25e-30
insulin-responsive compartment Hs cellular component 116 6.42e-30
macromolecular complex Hs cellular component 117 7.25e-30
protein kinase A catalytic subunit binding Hs molecular function 116 6.42e-30
ciliary rootlet Hs cellular component 279 8.69e-91
ciliary basal body Hs cellular component 279 8.69e-91
cell projection Hs cellular component 279 8.69e-91
neuron projection Hs cellular component 116 6.42e-30
intracellular membrane-bounded organelle Hs cellular component 117 7.25e-30
phagocytic vesicle Hs cellular component 117 7.25e-30
perinuclear region of cytoplasm Hs cellular component 117 7.25e-30
recycling endosome Hs cellular component 117 7.25e-30
recycling endosome membrane Hs cellular component 117 7.25e-30
extracellular exosome Hs cellular component 117 7.25e-30
postsynaptic recycling endosome Hs cellular component 117 7.25e-30

GO (InterProScan)

2 results

GO Term Analysis Type e-value
GTPase activity Pfam molecular function 3.4E-43
GTP binding Pfam molecular function 3.4E-43

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