Aniseed - Gene card

Gene 'Boschl.CG.Botznik201...'

Gene Card

Best human hits

BRD2; BRD3; BRDT

Species

B.schlosseri

Unique Gene ID

Boschl.g00031725

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g31725

Location

chrUn:207438678..207443202

Transcript Models and Sequences

Boschl.CG.Botznik2013.chrUn.g31725.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term	Analysis	Definition
Bromodomain-like_sf	SUPERFAMILY	Bromodomain-like superfamily
NET_dom	ProSiteProfiles	NET domain
NET_sf	Gene3D	NET domain superfamily
Bromodomain	Pfam	Bromodomain
NET_dom	Pfam	NET domain
Bromodomain-like_sf	Gene3D	Bromodomain-like superfamily
Bromodomain_CS	ProSitePatterns	Bromodomain, conserved site
Bromodomain	SMART	Bromodomain
Bromodomain	ProSiteProfiles	Bromodomain
Bromodomain	PRINTS	Bromodomain

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

37 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
chromatin binding	Hs	molecular function
transcription coactivator activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
chromatin organization	Hs	biological process
chromatin remodeling	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
mRNA processing	Hs	biological process
male meiotic nuclear division	Hs	biological process
male meiosis I	Hs	biological process
spermatogenesis	Hs	biological process
RNA splicing	Hs	biological process
cell differentiation	Hs	biological process
histone binding	Hs	molecular function
regulation of RNA splicing	Hs	biological process
positive regulation of transcription involved in meiotic cell cycle	Hs	biological process
meiotic cell cycle	Hs	biological process
lysine-acetylated histone binding	Hs	molecular function
condensed nuclear chromosome	Hs	cellular component
RNA polymerase II core binding	Hs	molecular function
p53 binding	Hs	molecular function
nucleoplasm	Hs	cellular component
chromosome	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
nucleosome assembly	Hs	biological process
cellular response to DNA damage stimulus	Hs	biological process
positive regulation of G2/M transition of mitotic cell cycle	Hs	biological process
viral process	Hs	biological process
nuclear speck	Hs	cellular component
positive regulation of transcription elongation from RNA polymerase II promoter	Hs	biological process
positive regulation of I-kappaB kinase/NF-kappaB signaling	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
regulation of inflammatory response	Hs	biological process
regulation of phosphorylation of RNA polymerase II C-terminal domain	Hs	biological process

GO (Blast)

6 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
chromatin binding	Hs	molecular function	318	7.40e-102
transcription coactivator activity	Hs	molecular function	320	1.15e-100
protein binding	Hs	molecular function	320	1.15e-100
nucleus	Hs	cellular component	320	1.15e-100
histone binding	Hs	molecular function	320	1.15e-100
lysine-acetylated histone binding	Hs	molecular function	320	1.15e-100

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	Gene3D	molecular function	5.9E-38