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GENE CARD

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  1. Gene 'Phmamm.CG.MTP2014.S1...'

Gene Card

Best human hits

DDX58; DICER1; IFIH1

Species

B.schlosseri

Unique Gene ID

Boschl.g00031815

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g31815

Location

chrUn:208052580..208059328

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g31815.01.t

External Database Gene Card

External database links

No result

Collections
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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Helicase_ATP-bd SMART Helicase superfamily 1/2, ATP-binding domain
Helicase/UvrB_N Pfam Helicase/UvrB, N-terminal
Helicase_ATP-bd ProSiteProfiles Helicase superfamily 1/2, ATP-binding domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

44 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 112 4.05e-28
nucleic acid binding Hs molecular function 112 4.05e-28
DNA binding Hs molecular function 72.4 1.95e-14
double-stranded DNA binding Hs molecular function 112 4.05e-28
RNA binding Hs molecular function 112 4.05e-28
double-stranded RNA binding Hs molecular function 112 4.05e-28
single-stranded RNA binding Hs molecular function 112 4.05e-28
helicase activity Hs molecular function 112 4.05e-28
nuclease activity Hs molecular function 63.9 1.70e-11
endonuclease activity Hs molecular function 63.9 1.70e-11
endoribonuclease activity Hs molecular function 63.9 1.70e-11
ribonuclease III activity Hs molecular function 63.9 1.70e-11
deoxyribonuclease I activity Hs molecular function 63.9 1.70e-11
protein binding Hs molecular function 112 4.05e-28
ATP binding Hs molecular function 112 4.05e-28
nucleus Hs cellular component 72.4 1.95e-14
cytoplasm Hs cellular component 112 4.05e-28
endoplasmic reticulum-Golgi intermediate compartment Hs cellular component 63.9 1.70e-11
cytosol Hs cellular component 112 4.05e-28
cytoskeleton Hs cellular component 112 4.05e-28
plasma membrane Hs cellular component 112 4.05e-28
bicellular tight junction Hs cellular component 112 4.05e-28
zinc ion binding Hs molecular function 112 4.05e-28
actin cytoskeleton Hs cellular component 112 4.05e-28
membrane Hs cellular component 112 4.05e-28
hydrolase activity Hs molecular function 112 4.05e-28
endoribonuclease activity, producing 5'-phosphomonoesters Hs molecular function 63.9 1.70e-11
protein domain specific binding Hs molecular function 63.9 1.70e-11
cell junction Hs cellular component 112 4.05e-28
axon Hs cellular component 63.9 1.70e-11
dendrite Hs cellular component 63.9 1.70e-11
growth cone Hs cellular component 63.9 1.70e-11
ubiquitin protein ligase binding Hs molecular function 112 4.05e-28
ruffle membrane Hs cellular component 112 4.05e-28
ARC complex Hs cellular component 63.9 1.70e-11
micro-ribonucleoprotein complex Hs cellular component 63.9 1.70e-11
siRNA binding Hs molecular function 63.9 1.70e-11
identical protein binding Hs molecular function 112 4.05e-28
cell projection Hs cellular component 112 4.05e-28
ribonucleoprotein complex binding Hs molecular function 72.4 1.95e-14
metal ion binding Hs molecular function 112 4.05e-28
extracellular exosome Hs cellular component 63.9 1.70e-11
RISC-loading complex Hs cellular component 63.9 1.70e-11
pre-miRNA binding Hs molecular function 63.9 1.70e-11

GO (InterProScan)

3 results

GO Term Analysis Type e-value
DNA binding Pfam molecular function 2.8E-18
ATP binding Pfam molecular function 2.8E-18
hydrolase activity Pfam molecular function 2.8E-18