Aniseed - Gene card

Gene Card

Best human hits

ZFP36; ZFP36L1; ZFP36L2

Species

B.schlosseri

Unique Gene ID

Boschl.g00031821

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g31821

Location

chrUn:208111043..208112299

Transcript Models and Sequences

Boschl.CG.Botznik2013.chrUn.g31821.01.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Znf_CCCH_sf	SUPERFAMILY	Zinc finger, CCCH-type superfamily
Znf_CCCH	SMART	Zinc finger, CCCH-type
Znf_CCCH	ProSiteProfiles	Zinc finger, CCCH-type
Znf_CCCH	Pfam	Zinc finger, CCCH-type

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

72 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
MAPK cascade	Hs	biological process
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	Hs	biological process
nuclear-transcribed mRNA poly(A) tail shortening	Hs	biological process
P-body	Hs	cellular component
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
vasculogenesis	Hs	biological process
proepicardium development	Hs	biological process
DNA binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
RNA binding	Hs	molecular function
mRNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
mRNA processing	Hs	biological process
mRNA catabolic process	Hs	biological process
regulation of translation	Hs	biological process
apoptotic process	Hs	biological process
multicellular organism development	Hs	biological process
heart development	Hs	biological process
cell proliferation	Hs	biological process
response to wounding	Hs	biological process
regulation of gene expression	Hs	biological process
phosphatidylinositol 3-kinase signaling	Hs	biological process
AU-rich element binding	Hs	molecular function
neural tube development	Hs	biological process
CCR4-NOT complex	Hs	cellular component
hemopoiesis	Hs	biological process
intracellular ribonucleoprotein complex	Hs	cellular component
regulation of mRNA 3'-end processing	Hs	biological process
cellular response to insulin stimulus	Hs	biological process
T cell differentiation in thymus	Hs	biological process
somatic stem cell population maintenance	Hs	biological process
multicellular organism growth	Hs	biological process
miRNA mediated inhibition of translation	Hs	biological process
intracellular signal transduction	Hs	biological process
mRNA 3'-UTR AU-rich region binding	Hs	molecular function
p38MAPK cascade	Hs	biological process
regulation of mRNA stability	Hs	biological process
protein kinase B signaling	Hs	biological process
regulation of B cell differentiation	Hs	biological process
positive regulation of fat cell differentiation	Hs	biological process
regulation of keratinocyte differentiation	Hs	biological process
negative regulation of myeloid cell differentiation	Hs	biological process
negative regulation of erythrocyte differentiation	Hs	biological process
regulation of myoblast differentiation	Hs	biological process
metal ion binding	Hs	molecular function
somatic stem cell division	Hs	biological process
mesendoderm development	Hs	biological process
embryonic organ development	Hs	biological process
negative regulation of inflammatory response	Hs	biological process
mRNA transport	Hs	biological process
positive regulation of nuclear-transcribed mRNA poly(A) tail shortening	Hs	biological process
definitive hemopoiesis	Hs	biological process
positive regulation of mRNA catabolic process	Hs	biological process
3'-UTR-mediated mRNA destabilization	Hs	biological process
RNA polymerase binding	Hs	molecular function
cellular response to lipopolysaccharide	Hs	biological process
cellular response to tumor necrosis factor	Hs	biological process
cellular response to epidermal growth factor stimulus	Hs	biological process
cellular response to glucocorticoid stimulus	Hs	biological process
cellular response to hypoxia	Hs	biological process
cellular response to transforming growth factor beta stimulus	Hs	biological process
14-3-3 protein binding	Hs	molecular function
regulation of stem cell proliferation	Hs	biological process
positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	Hs	biological process
ribonucleoprotein complex	Hs	cellular component
negative regulation of stem cell differentiation	Hs	biological process

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
P-body	Hs	cellular component	161	1.49e-46
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	161	1.49e-46
DNA binding	Hs	molecular function	161	1.49e-46
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	161	1.49e-46
RNA binding	Hs	molecular function	161	1.49e-46
mRNA binding	Hs	molecular function	161	1.49e-46
protein binding	Hs	molecular function	161	1.49e-46
nucleus	Hs	cellular component	161	1.49e-46
cytoplasm	Hs	cellular component	161	1.49e-46
cytosol	Hs	cellular component	161	1.49e-46
AU-rich element binding	Hs	molecular function	161	1.49e-46
CCR4-NOT complex	Hs	cellular component	112	5.21e-28
intracellular ribonucleoprotein complex	Hs	cellular component	161	1.49e-46
mRNA 3'-UTR AU-rich region binding	Hs	molecular function	161	1.49e-46
metal ion binding	Hs	molecular function	161	1.49e-46
RNA polymerase binding	Hs	molecular function	112	5.21e-28
14-3-3 protein binding	Hs	molecular function	161	1.49e-46
ribonucleoprotein complex	Hs	cellular component	112	5.21e-28

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
metal ion binding	Pfam	molecular function	5.1E-11