- Gene 'Boschl.CG.Botznik201...'
Gene Card
Best human hits
ALYREF; POLDIP3; RBM8A
Species
Unique Gene ID
Boschl.g00033709
Gene Model ID
Boschl.CG.Botznik2013.chrUn.g33709
Location
chrUn:220193838..220201846
Transcript Models and Sequences
n/a
You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see how you can interact with this tree
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
Click here to see the tree inference method
InterPro
7 results
| IPR Term | Analysis | Definition |
|---|---|---|
| PDIP3 | PANTHER | Polymerase delta-interacting protein 3 |
| PDIP3_RRM | CDD | PDIP3, RNA recognition motif |
| RRM_dom | SMART | RNA recognition motif domain |
| RRM_dom | Pfam | RNA recognition motif domain |
| Nucleotide-bd_a/b_plait_sf | Gene3D | Nucleotide-binding alpha-beta plait domain superfamily |
| RRM_dom | ProSiteProfiles | RNA recognition motif domain |
| RBD_domain_sf | SUPERFAMILY | RNA-binding domain superfamily |
| GO Term | Annotation Origin | Type |
|---|
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
17 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| transcription export complex | Hs | cellular component | 103 | 6.22e-26 |
| nucleic acid binding | Hs | molecular function | 103 | 6.22e-26 |
| RNA binding | Hs | molecular function | 103 | 6.22e-26 |
| mRNA binding | Hs | molecular function | 35.8 | 0.008 |
| protein binding | Hs | molecular function | 103 | 6.22e-26 |
| intracellular | Hs | cellular component | 103 | 6.22e-26 |
| nucleus | Hs | cellular component | 103 | 6.22e-26 |
| nucleoplasm | Hs | cellular component | 103 | 6.22e-26 |
| spliceosomal complex | Hs | cellular component | 35.8 | 0.008 |
| cytoplasm | Hs | cellular component | 103 | 6.22e-26 |
| cytosol | Hs | cellular component | 103 | 6.22e-26 |
| nuclear speck | Hs | cellular component | 103 | 6.22e-26 |
| dendrite | Hs | cellular component | 35.8 | 0.008 |
| exon-exon junction complex | Hs | cellular component | 103 | 6.22e-26 |
| cytoplasmic ribonucleoprotein granule | Hs | cellular component | 103 | 6.22e-26 |
| neuronal cell body | Hs | cellular component | 35.8 | 0.008 |
| catalytic step 2 spliceosome | Hs | cellular component | 35.8 | 0.008 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| nucleic acid binding | SUPERFAMILY | molecular function | 4.43E-14 |
| RNA binding | PANTHER | molecular function | 6.9E-38 |
| mRNA export from nucleus | PANTHER | biological process | 6.9E-38 |
