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GENE CARD

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  1. Gene 'Haaura.CG.MTP2014.S1...'

Gene Card

Best human hits

TUBA1A; TUBA1B; TUBA3C

Species

B.schlosseri

Unique Gene ID

Boschl.g00036720

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g36720

Location

chrUn:240765046..240768896

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g36720.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

13 results

IPR Term Analysis Definition
Tubulin/FtsZ_2-layer-sand-dom Pfam Tubulin/FtsZ, 2-layer sandwich domain
Tubulin_FtsZ_GTPase Pfam Tubulin/FtsZ, GTPase domain
Tubulin PANTHER Tubulin
Tubulin PRINTS Tubulin
Tubulin/FtsZ_GTPase_sf SUPERFAMILY Tubulin/FtsZ, GTPase domain superfamily
Alpha_tubulin PRINTS Alpha tubulin
Tubulin/FtsZ_GTPase_sf Gene3D Tubulin/FtsZ, GTPase domain superfamily
Tubulin_FtsZ_GTPase SMART Tubulin/FtsZ, GTPase domain
Tubulin/FtsZ_2-layer-sand-dom SMART Tubulin/FtsZ, 2-layer sandwich domain
Tubulin_C Gene3D Tubulin, C-terminal
Tubulin_CS ProSitePatterns Tubulin, conserved site
Tub_FtsZ_C SUPERFAMILY Tubulin/FtsZ, C-terminal
Tubulin/FtsZ_C_sf Gene3D Tubulin/FtsZ, C-terminal domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

21 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nucleotide binding Hs molecular function 939 0.0
double-stranded RNA binding Hs molecular function 935 0.0
GTPase activity Hs molecular function 939 0.0
structural molecule activity Hs molecular function 939 0.0
structural constituent of cytoskeleton Hs molecular function 939 0.0
protein binding Hs molecular function 939 0.0
GTP binding Hs molecular function 939 0.0
nucleus Hs cellular component 939 0.0
cytoplasm Hs cellular component 939 0.0
cytosol Hs cellular component 939 0.0
cytoskeleton Hs cellular component 939 0.0
microtubule Hs cellular component 939 0.0
cytoplasmic microtubule Hs cellular component 939 0.0
microtubule cytoskeleton Hs cellular component 939 0.0
protein domain specific binding Hs molecular function 939 0.0
ubiquitin protein ligase binding Hs molecular function 935 0.0
cytoplasmic ribonucleoprotein granule Hs cellular component 939 0.0
myelin sheath Hs cellular component 939 0.0
membrane raft Hs cellular component 939 0.0
recycling endosome Hs cellular component 939 0.0
extracellular exosome Hs cellular component 939 0.0

GO (InterProScan)

5 results

GO Term Analysis Type e-value
GTPase activity SMART molecular function 2.4E-83
structural constituent of cytoskeleton PRINTS molecular function 4.7E-121
GTP binding PRINTS molecular function 4.7E-121
microtubule PANTHER cellular component 0.0
microtubule-based process PANTHER biological process 0.0