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Gene Card

Best human hits

ACTN2; ACTN4

Species

B.schlosseri

Unique Gene ID

Boschl.g00046779

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g46779

Location

chrUn:291143742..291160103

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g46779.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
EF_hand_dom ProSiteProfiles EF-hand domain
Spectrin_repeat Pfam Spectrin repeat
CH_dom_sf SUPERFAMILY CH domain superfamily
Spectrin/alpha-actinin SMART Spectrin/alpha-actinin
Alpha-actinin_1 PANTHER Alpha-actinin 1
EF_hand_dom SMART EF-hand domain
EF-hand_Ca_insen Pfam EF-hand, Ca insensitive
EF-hand-dom_pair SUPERFAMILY EF-hand domain pair
CH_dom_sf Gene3D CH domain superfamily
EF_hand_dom CDD EF-hand domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

94 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
MAPK cascade Hs biological process
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function
response to hypoxia Hs biological process
stress fiber Hs cellular component
nucleoside binding Hs molecular function
platelet degranulation Hs biological process
RNA binding Hs molecular function
actin binding Hs molecular function
Ras guanyl-nucleotide exchange factor activity Hs molecular function
integrin binding Hs molecular function
calcium ion binding Hs molecular function
protein binding Hs molecular function
phosphatidylinositol-4,5-bisphosphate binding Hs molecular function
extracellular region Hs cellular component
extracellular space Hs cellular component
intracellular Hs cellular component
nucleus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
actin filament Hs cellular component
plasma membrane Hs cellular component
brush border Hs cellular component
cell-cell junction Hs cellular component
focal adhesion Hs cellular component
muscle contraction Hs biological process
cell adhesion Hs biological process
cytoskeletal protein binding Hs molecular function
structural constituent of muscle Hs molecular function
protein transport Hs biological process
actin cytoskeleton Hs cellular component
nuclear body Hs cellular component
protein domain specific binding Hs molecular function
sarcomere Hs cellular component
Z disc Hs cellular component
vesicle transport along actin filament Hs biological process
cell junction Hs cellular component
filopodium Hs cellular component
LIM domain binding Hs molecular function
positive regulation of cell migration Hs biological process
ligand-dependent nuclear receptor transcription coactivator activity Hs molecular function
thyroid hormone receptor coactivator activity Hs molecular function
intracellular ribonucleoprotein complex Hs cellular component
cortical cytoskeleton Hs cellular component
cortical actin cytoskeleton Hs cellular component
platelet alpha granule lumen Hs cellular component
pseudopodium Hs cellular component
titin binding Hs molecular function
chromatin DNA binding Hs molecular function
macromolecular complex Hs cellular component
nuclear hormone receptor binding Hs molecular function
peroxisome proliferator activated receptor signaling pathway Hs biological process
regulation of membrane potential Hs biological process
identical protein binding Hs molecular function
protein homodimerization activity Hs molecular function
retinoic acid receptor binding Hs molecular function
regulation of apoptotic process Hs biological process
neuron projection Hs cellular component
dendritic spine Hs cellular component
negative regulation of potassium ion transport Hs biological process
ion channel binding Hs molecular function
sarcomere organization Hs biological process
metal ion binding Hs molecular function
protein dimerization activity Hs molecular function
protein N-terminus binding Hs molecular function
focal adhesion assembly Hs biological process
retinoic acid receptor signaling pathway Hs biological process
perinuclear region of cytoplasm Hs cellular component
actin filament binding Hs molecular function
actin filament bundle assembly Hs biological process
protein homotetramerization Hs biological process
FATZ binding Hs molecular function
cardiac muscle cell development Hs biological process
extracellular exosome Hs cellular component
titin Z domain binding Hs molecular function
bicellular tight junction assembly Hs biological process
protein localization to plasma membrane Hs biological process
negative regulation of substrate adhesion-dependent cell spreading Hs biological process
regulation of nucleic acid-templated transcription Hs biological process
negative regulation of protein localization to cell surface Hs biological process
positive regulation of cation channel activity Hs biological process
actin crosslink formation Hs biological process
ruffle Hs cellular component
double-stranded RNA binding Hs molecular function
fascia adherens Hs cellular component
actin filament organization Hs biological process
skeletal muscle atrophy Hs biological process
membrane Hs cellular component
vinculin binding Hs molecular function
platelet formation Hs biological process
cell projection Hs cellular component
positive regulation of skeletal muscle fiber development Hs biological process
actin filament network formation Hs biological process
bone morphogenesis Hs biological process

GO (Blast)

57 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 919 0.0
stress fiber Hs cellular component 919 0.0
nucleoside binding Hs molecular function 919 0.0
RNA binding Hs molecular function 919 0.0
actin binding Hs molecular function 929 0.0
Ras guanyl-nucleotide exchange factor activity Hs molecular function 929 0.0
integrin binding Hs molecular function 929 0.0
calcium ion binding Hs molecular function 929 0.0
protein binding Hs molecular function 929 0.0
phosphatidylinositol-4,5-bisphosphate binding Hs molecular function 929 0.0
extracellular region Hs cellular component 929 0.0
extracellular space Hs cellular component 919 0.0
intracellular Hs cellular component 919 0.0
nucleus Hs cellular component 919 0.0
cytoplasm Hs cellular component 929 0.0
cytosol Hs cellular component 929 0.0
cytoskeleton Hs cellular component 929 0.0
actin filament Hs cellular component 929 0.0
plasma membrane Hs cellular component 929 0.0
brush border Hs cellular component 919 0.0
cell-cell junction Hs cellular component 919 0.0
focal adhesion Hs cellular component 929 0.0
cytoskeletal protein binding Hs molecular function 929 0.0
structural constituent of muscle Hs molecular function 929 0.0
actin cytoskeleton Hs cellular component 919 0.0
nuclear body Hs cellular component 919 0.0
protein domain specific binding Hs molecular function 929 0.0
sarcomere Hs cellular component 929 0.0
Z disc Hs cellular component 929 0.0
cell junction Hs cellular component 919 0.0
filopodium Hs cellular component 929 0.0
LIM domain binding Hs molecular function 929 0.0
ligand-dependent nuclear receptor transcription coactivator activity Hs molecular function 929 0.0
thyroid hormone receptor coactivator activity Hs molecular function 929 0.0
intracellular ribonucleoprotein complex Hs cellular component 919 0.0
cortical cytoskeleton Hs cellular component 919 0.0
cortical actin cytoskeleton Hs cellular component 929 0.0
platelet alpha granule lumen Hs cellular component 929 0.0
pseudopodium Hs cellular component 929 0.0
titin binding Hs molecular function 929 0.0
chromatin DNA binding Hs molecular function 919 0.0
macromolecular complex Hs cellular component 919 0.0
nuclear hormone receptor binding Hs molecular function 919 0.0
identical protein binding Hs molecular function 929 0.0
protein homodimerization activity Hs molecular function 929 0.0
retinoic acid receptor binding Hs molecular function 919 0.0
neuron projection Hs cellular component 919 0.0
dendritic spine Hs cellular component 929 0.0
ion channel binding Hs molecular function 929 0.0
metal ion binding Hs molecular function 929 0.0
protein dimerization activity Hs molecular function 929 0.0
protein N-terminus binding Hs molecular function 919 0.0
perinuclear region of cytoplasm Hs cellular component 919 0.0
actin filament binding Hs molecular function 929 0.0
FATZ binding Hs molecular function 929 0.0
extracellular exosome Hs cellular component 929 0.0
titin Z domain binding Hs molecular function 929 0.0

GO (InterProScan)

5 results

GO Term Analysis Type e-value
calcium ion binding CDD molecular function 3.07602E-11
protein binding Pfam molecular function 1.3E-22
actin filament binding PANTHER molecular function 0.0
actin filament bundle assembly PANTHER biological process 0.0
actin crosslink formation PANTHER biological process 0.0

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