Login
Help

GENE CARD

Submit your Data

  1. > 
  2. Gene 'Phmamm.CG.MTP2014.S4...' > 
  3. Gene 'Boschl.CG.Botznik201...'

Gene Card

Best human hits

EXO1; FEN1

Species

B.schlosseri

Unique Gene ID

Boschl.g00051818

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g51818

Location

chrUn:318122171..318123130

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g51818.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
5-3_exonuclease_C_sf SUPERFAMILY 5'-3' exonuclease, C-terminal domain superfamily
XPG/Rad2 PANTHER XPG/Rad2 endonuclease
HhH2 SMART Helix-hairpin-helix motif, class 2
Exo1 PANTHER Exonuclease 1
EXO1_H3TH CDD Exonuclease-1, H3TH domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

33 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
DNA synthesis involved in DNA repair Hs biological process
strand displacement Hs biological process
immune system process Hs biological process
DNA binding Hs molecular function
chromatin binding Hs molecular function
catalytic activity Hs molecular function
nuclease activity Hs molecular function
endonuclease activity Hs molecular function
RNA-DNA hybrid ribonuclease activity Hs molecular function
exonuclease activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
plasma membrane Hs cellular component
DNA replication Hs biological process
DNA repair Hs biological process
mismatch repair Hs biological process
DNA recombination Hs biological process
cellular response to DNA damage stimulus Hs biological process
5'-3' exonuclease activity Hs molecular function
somatic hypermutation of immunoglobulin genes Hs biological process
nuclear body Hs cellular component
hydrolase activity Hs molecular function
hydrolase activity, acting on ester bonds Hs molecular function
5'-3' exodeoxyribonuclease activity Hs molecular function
single-stranded DNA 5'-3' exodeoxyribonuclease activity Hs molecular function
isotype switching Hs biological process
metal ion binding Hs molecular function
flap endonuclease activity Hs molecular function
meiotic cell cycle Hs biological process
double-stranded DNA 5'-3' exodeoxyribonuclease activity Hs molecular function
nucleic acid phosphodiester bond hydrolysis Hs biological process
RNA phosphodiester bond hydrolysis, endonucleolytic Hs biological process

GO (Blast)

30 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
magnesium ion binding Hs molecular function 40.8 8.52e-05
nuclear chromosome, telomeric region Hs cellular component 40.8 8.52e-05
DNA binding Hs molecular function 124 1.12e-33
chromatin binding Hs molecular function 124 1.12e-33
damaged DNA binding Hs molecular function 40.8 8.52e-05
double-stranded DNA binding Hs molecular function 40.8 8.52e-05
catalytic activity Hs molecular function 124 1.12e-33
nuclease activity Hs molecular function 124 1.12e-33
endonuclease activity Hs molecular function 124 1.12e-33
RNA-DNA hybrid ribonuclease activity Hs molecular function 124 1.12e-33
exonuclease activity Hs molecular function 124 1.12e-33
protein binding Hs molecular function 124 1.12e-33
nucleus Hs cellular component 124 1.12e-33
nucleoplasm Hs cellular component 124 1.12e-33
nucleolus Hs cellular component 40.8 8.52e-05
mitochondrion Hs cellular component 40.8 8.52e-05
plasma membrane Hs cellular component 124 1.12e-33
double-stranded DNA exodeoxyribonuclease activity Hs molecular function 40.8 8.52e-05
5'-3' exonuclease activity Hs molecular function 124 1.12e-33
membrane Hs cellular component 40.8 8.52e-05
nuclear body Hs cellular component 124 1.12e-33
hydrolase activity Hs molecular function 124 1.12e-33
hydrolase activity, acting on ester bonds Hs molecular function 124 1.12e-33
5'-flap endonuclease activity Hs molecular function 40.8 8.52e-05
macromolecular complex Hs cellular component 40.8 8.52e-05
5'-3' exodeoxyribonuclease activity Hs molecular function 124 1.12e-33
single-stranded DNA 5'-3' exodeoxyribonuclease activity Hs molecular function 124 1.12e-33
metal ion binding Hs molecular function 124 1.12e-33
flap endonuclease activity Hs molecular function 124 1.12e-33
double-stranded DNA 5'-3' exodeoxyribonuclease activity Hs molecular function 124 1.12e-33

GO (InterProScan)

5 results

GO Term Analysis Type e-value
DNA binding CDD molecular function 1.51128E-29
catalytic activity SMART molecular function 3.7E-5
nuclease activity PANTHER molecular function 2.0E-32
DNA repair PANTHER biological process 2.0E-32
5'-3' exodeoxyribonuclease activity PANTHER molecular function 2.0E-32

Back to Top