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GENE CARD

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Gene Card

Best human hits

RPS27A; UBB; ZFAND4

Species

B.schlosseri

Unique Gene ID

Boschl.g00066278

Gene Model ID

Boschl.CG.Botznik2013.chrUn.g66278

Location

chrUn:380185932..380192511

Transcript Models and Sequences

  Boschl.CG.Botznik2013.chrUn.g66278.01.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Ubiquitin-like_domsf SUPERFAMILY Ubiquitin-like domain superfamily
Ubiquitin_dom ProSiteProfiles Ubiquitin domain
Ubiquitin_dom Pfam Ubiquitin domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

29 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 39.7 1.61e-04
structural constituent of ribosome Hs molecular function 39.7 1.61e-04
protein binding Hs molecular function 99.4 8.16e-25
extracellular space Hs cellular component 40.4 1.52e-04
nucleus Hs cellular component 40.4 1.52e-04
nucleoplasm Hs cellular component 40.4 1.52e-04
nucleolus Hs cellular component 39.7 1.61e-04
cytoplasm Hs cellular component 40.4 1.52e-04
mitochondrion Hs cellular component 40.4 1.52e-04
mitochondrial outer membrane Hs cellular component 40.4 1.52e-04
endoplasmic reticulum membrane Hs cellular component 40.4 1.52e-04
cytosol Hs cellular component 40.4 1.52e-04
ribosome Hs cellular component 39.7 1.61e-04
plasma membrane Hs cellular component 40.4 1.52e-04
zinc ion binding Hs molecular function 99.4 8.16e-25
endosome membrane Hs cellular component 40.4 1.52e-04
small ribosomal subunit Hs cellular component 39.7 1.61e-04
membrane Hs cellular component 39.7 1.61e-04
cytosolic small ribosomal subunit Hs cellular component 39.7 1.61e-04
intracellular ribonucleoprotein complex Hs cellular component 39.7 1.61e-04
endocytic vesicle membrane Hs cellular component 40.4 1.52e-04
vesicle Hs cellular component 40.4 1.52e-04
neuron projection Hs cellular component 40.4 1.52e-04
neuronal cell body Hs cellular component 40.4 1.52e-04
myelin sheath Hs cellular component 39.7 1.61e-04
host cell Hs cellular component 40.4 1.52e-04
endoplasmic reticulum quality control compartment Hs cellular component 40.4 1.52e-04
metal ion binding Hs molecular function 99.4 8.16e-25
extracellular exosome Hs cellular component 40.4 1.52e-04

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Pfam molecular function 3.3E-6