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Gene Card

Best human hits

MIER2; NCOR1; NCOR2

Species

C.savignyi

Unique Gene ID

Cisavi.g00000105

Gene Model ID

Cisavi.CG.ENS81.R0.203691-210840

Location

R0:203690..210840

Transcript Models and Sequences

  Cisavi.CG.ENS81.R0.203691-210840.07081.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
N-CoR_GPS2_interact Pfam N-CoR, GPS2-interacting domain
SANT/Myb Pfam SANT/Myb domain
Homeobox-like_sf SUPERFAMILY Homeobox-like domain superfamily
SANT_dom ProSiteProfiles SANT domain
SANT/Myb SMART SANT/Myb domain
SANT/Myb CDD SANT/Myb domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

39 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
histone deacetylase complex Hs cellular component
negative regulation of transcription from RNA polymerase II promoter Hs biological process
chromatin Hs cellular component
nuclear chromatin Hs cellular component
RNA polymerase II regulatory region DNA binding Hs molecular function
RNA polymerase II activating transcription factor binding Hs molecular function
DNA binding Hs molecular function
chromatin binding Hs molecular function
transcription corepressor activity Hs molecular function
Notch binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytosol Hs cellular component
spindle microtubule Hs cellular component
chromatin organization Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
transcription from RNA polymerase II promoter Hs biological process
circadian rhythm Hs biological process
transcription factor binding Hs molecular function
membrane Hs cellular component
nuclear matrix Hs cellular component
Sin3 complex Hs cellular component
nuclear body Hs cellular component
ligand-dependent nuclear receptor binding Hs molecular function
transcriptional repressor complex Hs cellular component
regulation of lipid metabolic process Hs biological process
response to estradiol Hs biological process
nuclear hormone receptor binding Hs molecular function
glucocorticoid receptor binding Hs molecular function
histone deacetylase binding Hs molecular function
retinoic acid receptor binding Hs molecular function
transcription regulatory region DNA binding Hs molecular function
negative regulation of JNK cascade Hs biological process
retinoid X receptor binding Hs molecular function
thyroid hormone receptor binding Hs molecular function
protein N-terminus binding Hs molecular function
spindle assembly Hs biological process

GO (Blast)

32 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
histone deacetylase complex Hs cellular component 374 1.31e-115
chromatin Hs cellular component 374 1.31e-115
nuclear chromatin Hs cellular component 374 1.31e-115
RNA polymerase II regulatory region DNA binding Hs molecular function 374 1.31e-115
RNA polymerase II activating transcription factor binding Hs molecular function 370 3.12e-114
DNA binding Hs molecular function 374 1.31e-115
chromatin binding Hs molecular function 374 1.31e-115
transcription corepressor activity Hs molecular function 374 1.31e-115
histone deacetylase activity Hs molecular function 58.2 5.59e-09
Notch binding Hs molecular function 374 1.31e-115
protein binding Hs molecular function 374 1.31e-115
nucleus Hs cellular component 374 1.31e-115
nucleoplasm Hs cellular component 374 1.31e-115
cytoplasm Hs cellular component 58.2 5.59e-09
cytosol Hs cellular component 370 3.12e-114
spindle microtubule Hs cellular component 370 3.12e-114
transcription factor binding Hs molecular function 374 1.31e-115
membrane Hs cellular component 374 1.31e-115
nuclear matrix Hs cellular component 374 1.31e-115
Sin3 complex Hs cellular component 370 3.12e-114
nuclear body Hs cellular component 374 1.31e-115
ligand-dependent nuclear receptor binding Hs molecular function 374 1.31e-115
transcriptional repressor complex Hs cellular component 374 1.31e-115
macromolecular complex Hs cellular component 58.2 5.59e-09
nuclear hormone receptor binding Hs molecular function 370 3.12e-114
glucocorticoid receptor binding Hs molecular function 374 1.31e-115
histone deacetylase binding Hs molecular function 374 1.31e-115
retinoic acid receptor binding Hs molecular function 374 1.31e-115
transcription regulatory region DNA binding Hs molecular function 370 3.12e-114
retinoid X receptor binding Hs molecular function 374 1.31e-115
thyroid hormone receptor binding Hs molecular function 370 3.12e-114
protein N-terminus binding Hs molecular function 374 1.31e-115

GO (InterProScan)

1 result

GO Term Analysis Type e-value
DNA binding SUPERFAMILY molecular function 6.58E-15

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