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Gene Card

Best human hits

SNAI1; SNAI2; SNAI3

Species

C.savignyi

Unique Gene ID

Cisavi.g00000370

Gene Model ID

Cisavi.CG.ENS81.R1.2114111-2122056

Location

R1:2114110..2122056

Transcript Models and Sequences

  Cisavi.CG.ENS81.R1.2114111-2122056.16883.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Znf_C2H2_type SMART Zinc finger C2H2-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

60 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
nuclear chromatin Hs cellular component
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function
osteoblast differentiation Hs biological process
mesoderm formation Hs biological process
epithelial to mesenchymal transition Hs biological process
nucleic acid binding Hs molecular function
DNA binding Hs molecular function
chromatin binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function
copper ion binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
transcription factor complex Hs cellular component
pericentric heterochromatin Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
Notch signaling pathway Hs biological process
multicellular organism development Hs biological process
mesoderm development Hs biological process
sensory perception of sound Hs biological process
response to radiation Hs biological process
positive regulation of epithelial to mesenchymal transition Hs biological process
neural crest cell development Hs biological process
cell migration Hs biological process
kinase binding Hs molecular function
positive regulation of cell migration Hs biological process
positive regulation of histone acetylation Hs biological process
negative regulation of catenin import into nucleus Hs biological process
negative regulation of apoptotic process Hs biological process
pigmentation Hs biological process
negative regulation of DNA damage response, signal transduction by p53 class mediator Hs biological process
sequence-specific DNA binding Hs molecular function
positive regulation of fat cell differentiation Hs biological process
regulation of osteoblast differentiation Hs biological process
negative regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription, DNA-templated Hs biological process
metal ion binding Hs molecular function
palate development Hs biological process
canonical Wnt signaling pathway Hs biological process
epithelium development Hs biological process
cartilage morphogenesis Hs biological process
left/right pattern formation Hs biological process
heterochromatin organization Hs biological process
cellular response to epidermal growth factor stimulus Hs biological process
cellular response to ionizing radiation Hs biological process
negative regulation of canonical Wnt signaling pathway Hs biological process
negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage Hs biological process
negative regulation of stem cell proliferation Hs biological process
negative regulation of extrinsic apoptotic signaling pathway in absence of ligand Hs biological process

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nuclear chromatin Hs cellular component 189 1.33e-60
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 182 1.51e-57
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 182 1.51e-57
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 189 1.33e-60
transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 182 1.51e-57
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 189 1.33e-60
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 182 1.51e-57
nucleic acid binding Hs molecular function 189 1.33e-60
DNA binding Hs molecular function 189 1.33e-60
chromatin binding Hs molecular function 189 1.33e-60
transcription factor activity, sequence-specific DNA binding Hs molecular function 182 1.51e-57
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function 189 1.33e-60
copper ion binding Hs molecular function 182 1.51e-57
protein binding Hs molecular function 189 1.33e-60
nucleus Hs cellular component 189 1.33e-60
nucleoplasm Hs cellular component 189 1.33e-60
transcription factor complex Hs cellular component 182 1.51e-57
pericentric heterochromatin Hs cellular component 167 4.07e-52
cytoplasm Hs cellular component 189 1.33e-60
cytosol Hs cellular component 167 4.07e-52
kinase binding Hs molecular function 167 4.07e-52
sequence-specific DNA binding Hs molecular function 189 1.33e-60
metal ion binding Hs molecular function 189 1.33e-60

GO (InterProScan)

1 result

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 3.5E-5

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