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GENE CARD

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Gene Card

Best human hits

FNTA; PTAR1; RABGGTA

Species

C.savignyi

Unique Gene ID

Cisavi.g00000391

Gene Model ID

Cisavi.CG.ENS81.R1.2273225-2278476

Location

R1:2273224..2278476

Transcript Models and Sequences

  Cisavi.CG.ENS81.R1.2273225-2278476.17044.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
RabGGT_asu_insert-domain Pfam Rab geranylgeranyltransferase, alpha subunit, insert-domain
Prenyl_trans_a ProSiteProfiles Protein prenyltransferase, alpha subunit
RabGGTase_alpha PANTHER Geranylgeranyl transferase type-2 subunit alpha
Prenyl_trans_a Pfam Protein prenyltransferase, alpha subunit

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
prenyltransferase activity Hs molecular function
Rab geranylgeranyltransferase activity Hs molecular function
protein binding Hs molecular function
nucleoplasm Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
Rab-protein geranylgeranyltransferase complex Hs cellular component
cellular protein modification process Hs biological process
visual perception Hs biological process
zinc ion binding Hs molecular function
protein prenyltransferase activity Hs molecular function
transferase activity Hs molecular function
Rab GTPase binding Hs molecular function
protein prenylation Hs biological process
protein geranylgeranylation Hs biological process
regulation of apoptotic process Hs biological process
post-translational protein modification Hs biological process
protein heterodimerization activity Hs molecular function

GO (Blast)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
prenyltransferase activity Hs molecular function 313 3.84e-103
protein farnesyltransferase activity Hs molecular function 67.8 1.11e-12
protein geranylgeranyltransferase activity Hs molecular function 67.8 1.11e-12
CAAX-protein geranylgeranyltransferase activity Hs molecular function 67.8 1.11e-12
Rab geranylgeranyltransferase activity Hs molecular function 313 3.84e-103
protein binding Hs molecular function 313 3.84e-103
nucleoplasm Hs cellular component 313 3.84e-103
cytoplasm Hs cellular component 67.8 1.11e-12
cytosol Hs cellular component 313 3.84e-103
microtubule associated complex Hs cellular component 67.8 1.11e-12
plasma membrane Hs cellular component 313 3.84e-103
CAAX-protein geranylgeranyltransferase complex Hs cellular component 67.8 1.11e-12
protein farnesyltransferase complex Hs cellular component 67.8 1.11e-12
Rab-protein geranylgeranyltransferase complex Hs cellular component 313 3.84e-103
microtubule binding Hs molecular function 67.8 1.11e-12
zinc ion binding Hs molecular function 313 3.84e-103
protein prenyltransferase activity Hs molecular function 313 3.84e-103
transferase activity Hs molecular function 313 3.84e-103
Rab GTPase binding Hs molecular function 313 3.84e-103
acetylcholine receptor regulator activity Hs molecular function 67.8 1.11e-12
receptor tyrosine kinase binding Hs molecular function 67.8 1.11e-12
alpha-tubulin binding Hs molecular function 67.8 1.11e-12
protein heterodimerization activity Hs molecular function 313 3.84e-103
transferase complex Hs cellular component 40.0 0.001

GO (InterProScan)

6 results

GO Term Analysis Type e-value
Rab geranylgeranyltransferase activity Pfam molecular function 5.4E-8
Rab-protein geranylgeranyltransferase complex PANTHER cellular component 1.3E-92
zinc ion binding Pfam molecular function 5.4E-8
protein prenyltransferase activity Pfam molecular function 2.8E-10
protein prenylation Pfam biological process 2.8E-10
protein geranylgeranylation PANTHER biological process 1.3E-92