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GENE CARD

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Gene Card

Best human hits

TBR1; TBX21; TBX5

Species

C.savignyi

Unique Gene ID

Cisavi.g00000917

Gene Model ID

Cisavi.CG.ENS81.R107.324117-331918

Location

R107:324116..331918

Transcript Models and Sequences

  Cisavi.CG.ENS81.R107.324117-331918.03246.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
TF_T-box PRINTS Transcription factor, T-box
TF_T-box SMART Transcription factor, T-box
T-box_sf Gene3D T-box superfamily
p53-like_TF_DNA-bd SUPERFAMILY p53-like transcription factor, DNA-binding
TF_T-box ProSiteProfiles Transcription factor, T-box
TF_T-box Pfam Transcription factor, T-box

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 166 8.86e-44
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 174 9.48e-46
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 174 9.48e-46
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 168 1.26e-44
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 166 8.86e-44
DNA binding Hs molecular function 174 9.48e-46
transcription factor activity, sequence-specific DNA binding Hs molecular function 174 9.48e-46
protein binding Hs molecular function 168 1.26e-44
nucleus Hs cellular component 174 9.48e-46
nucleoplasm Hs cellular component 166 8.86e-44
cytoplasm Hs cellular component 166 8.86e-44
transcription factor binding Hs molecular function 166 8.86e-44
protein kinase binding Hs molecular function 174 9.48e-46
macromolecular complex Hs cellular component 166 8.86e-44
protein-DNA complex Hs cellular component 166 8.86e-44
neuronal cell body Hs cellular component 168 1.26e-44
sequence-specific DNA binding Hs molecular function 168 1.26e-44
transcription regulatory region DNA binding Hs molecular function 168 1.26e-44

GO (InterProScan)

3 results

GO Term Analysis Type e-value
transcription factor activity, sequence-specific DNA binding SMART molecular function 1.9E-68
nucleus SMART cellular component 1.9E-68
regulation of transcription, DNA-templated SMART biological process 1.9E-68