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GENE CARD

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Gene Card

Best human hits

HAND1; HAND2; SCX

Species

C.savignyi

Unique Gene ID

Cisavi.g00002155

Gene Model ID

Cisavi.CG.ENS81.R14.220962-222552

Location

R14:220961..222552

Transcript Models and Sequences

  Cisavi.CG.ENS81.R14.220962-222552.16137.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
bHLH_dom SMART Myc-type, basic helix-loop-helix (bHLH) domain
HLH_DNA-bd_sf Gene3D Helix-loop-helix DNA-binding domain superfamily
bHLH_dom Pfam Myc-type, basic helix-loop-helix (bHLH) domain
bHLH_dom CDD Myc-type, basic helix-loop-helix (bHLH) domain
HLH_DNA-bd_sf SUPERFAMILY Helix-loop-helix DNA-binding domain superfamily
bHLH_dom ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

31 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
nuclear chromatin Hs cellular component 64.7 2.48e-12
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 64.7 2.48e-12
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 63.2 7.89e-12
RNA polymerase II distal enhancer sequence-specific DNA binding Hs molecular function 63.5 4.84e-12
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 64.7 2.48e-12
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 64.7 2.48e-12
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 63.2 7.89e-12
transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding Hs molecular function 63.5 4.84e-12
DNA binding Hs molecular function 64.7 2.48e-12
AT DNA binding Hs molecular function 64.7 2.48e-12
transcription coactivator activity Hs molecular function 64.7 2.48e-12
transcription corepressor activity Hs molecular function 63.2 7.89e-12
protein binding Hs molecular function 64.7 2.48e-12
nucleus Hs cellular component 64.7 2.48e-12
nucleoplasm Hs cellular component 63.2 7.89e-12
transcription factor complex Hs cellular component 64.7 2.48e-12
nucleolus Hs cellular component 63.2 7.89e-12
cytoplasm Hs cellular component 63.2 7.89e-12
transcription factor binding Hs molecular function 64.7 2.48e-12
enzyme binding Hs molecular function 63.2 7.89e-12
macromolecular complex Hs cellular component 64.7 2.48e-12
activating transcription factor binding Hs molecular function 64.7 2.48e-12
identical protein binding Hs molecular function 63.2 7.89e-12
protein homodimerization activity Hs molecular function 64.7 2.48e-12
bHLH transcription factor binding Hs molecular function 63.5 4.84e-12
sequence-specific DNA binding Hs molecular function 64.7 2.48e-12
transcription regulatory region DNA binding Hs molecular function 64.7 2.48e-12
protein heterodimerization activity Hs molecular function 64.7 2.48e-12
protein dimerization activity Hs molecular function 64.7 2.48e-12
E-box binding Hs molecular function 64.7 2.48e-12
RNA polymerase II transcription factor complex Hs cellular component 63.2 7.89e-12

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein dimerization activity Gene3D molecular function 7.4E-19