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GENE CARD

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Gene Card

Best human hits

SLIT1; SLIT2; SLIT3

Species

C.savignyi

Unique Gene ID

Cisavi.g00002445

Gene Model ID

Cisavi.CG.ENS81.R148.436988-458312

Location

R148:436987..458312

Transcript Models and Sequences

  Cisavi.CG.ENS81.R148.436988-458312.10141.t
Cisavi.CG.ENS81.R148.436988-458312.10142.t
Cisavi.CG.ENS81.R148.436988-458312.10143.t
Cisavi.CG.ENS81.R148.436988-458312.10144.t
Cisavi.CG.ENS81.R148.436988-458312.10145.t
Cisavi.CG.ENS81.R148.436988-458312.10146.t
Cisavi.CG.ENS81.R148.436988-458312.10147.t
Cisavi.CG.ENS81.R148.436988-458312.10148.t
Cisavi.CG.ENS81.R148.436988-458312.10149.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

23 results

IPR Term Analysis Definition
EGF_Ca-bd_CS ProSitePatterns EGF-like calcium-binding, conserved site
LRR_dom_sf Gene3D Leucine-rich repeat domain superfamily
ConA-like_dom_sf SUPERFAMILY Concanavalin A-like lectin/glucanase domain superfamily
Cys-rich_flank_reg_C SMART Cysteine-rich flanking region, C-terminal
Cys-rich_flank_reg_C Pfam Cysteine-rich flanking region, C-terminal
Leu-rich_rpt_typical-subtyp SMART Leucine-rich repeat, typical subtype
EGF-like_dom ProSiteProfiles EGF-like domain
Cys_knot_C ProSiteProfiles Cystine knot, C-terminal
EGF-like_dom SMART EGF-like domain
Laminin_G ProSiteProfiles Laminin G domain
EGF-like_CS ProSitePatterns EGF-like, conserved site
LRRNT SMART Leucine-rich repeat N-terminal domain
EGF-like_dom Pfam EGF-like domain
Cys_knot_C ProSitePatterns Cystine knot, C-terminal
Laminin_G Pfam Laminin G domain
Leu-rich_rpt Pfam Leucine-rich repeat
LRRNT Pfam Leucine-rich repeat N-terminal domain
Cys_knot_C SMART Cystine knot, C-terminal
EGF-like_Ca-bd_dom SMART EGF-like calcium-binding domain
Leu-rich_rpt ProSiteProfiles Leucine-rich repeat
EGF-type_Asp/Asn_hydroxyl_site ProSitePatterns EGF-type aspartate/asparagine hydroxylation site
Laminin_G SMART Laminin G domain
LRR_5 Pfam Leucine rich repeat 5

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

55 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
ureteric bud development Hs biological process
negative regulation of protein phosphorylation Hs biological process
cell migration involved in sprouting angiogenesis Hs biological process
GTPase inhibitor activity Hs molecular function
calcium ion binding Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
extracellular space Hs cellular component
intracellular Hs cellular component
cytoplasm Hs cellular component
mitochondrion Hs cellular component
plasma membrane Hs cellular component
chemotaxis Hs biological process
nuclear migration Hs biological process
multicellular organism development Hs biological process
nervous system development Hs biological process
axonogenesis Hs biological process
axon guidance Hs biological process
motor neuron axon guidance Hs biological process
heparin binding Hs molecular function
negative regulation of cell proliferation Hs biological process
animal organ morphogenesis Hs biological process
negative regulation of lamellipodium assembly Hs biological process
negative regulation of gene expression Hs biological process
membrane Hs cellular component
olfactory bulb development Hs biological process
telencephalon cell migration Hs biological process
cell differentiation Hs biological process
negative regulation of cell growth Hs biological process
negative regulation of cell migration Hs biological process
negative regulation of actin filament polymerization Hs biological process
retinal ganglion cell axon guidance Hs biological process
cellular response to hormone stimulus Hs biological process
dorsal/ventral axon guidance Hs biological process
negative regulation of GTPase activity Hs biological process
Roundabout signaling pathway Hs biological process
identical protein binding Hs molecular function
protein homodimerization activity Hs molecular function
positive regulation of apoptotic process Hs biological process
negative regulation of vascular permeability Hs biological process
laminin-1 binding Hs molecular function
proteoglycan binding Hs molecular function
Roundabout binding Hs molecular function
branching morphogenesis of an epithelial tube Hs biological process
neuron projection morphogenesis Hs biological process
axon extension involved in axon guidance Hs biological process
forebrain morphogenesis Hs biological process
positive regulation of axonogenesis Hs biological process
negative chemotaxis Hs biological process
induction of negative chemotaxis Hs biological process
negative regulation of small GTPase mediated signal transduction Hs biological process
response to cortisol Hs biological process
negative regulation of synapse assembly Hs biological process
extracellular exosome Hs cellular component
negative regulation of neutrophil chemotaxis Hs biological process

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
GTPase inhibitor activity Hs molecular function 1232 0.0
calcium ion binding Hs molecular function 1232 0.0
protein binding Hs molecular function 1232 0.0
extracellular region Hs cellular component 1232 0.0
extracellular space Hs cellular component 1232 0.0
intracellular Hs cellular component 1213 0.0
cytoplasm Hs cellular component 1232 0.0
mitochondrion Hs cellular component 1165 0.0
plasma membrane Hs cellular component 1232 0.0
heparin binding Hs molecular function 1232 0.0
membrane Hs cellular component 1232 0.0
identical protein binding Hs molecular function 1232 0.0
protein homodimerization activity Hs molecular function 1232 0.0
laminin-1 binding Hs molecular function 1232 0.0
proteoglycan binding Hs molecular function 1232 0.0
Roundabout binding Hs molecular function 1232 0.0
extracellular exosome Hs cellular component 1232 0.0

GO (InterProScan)

2 results

GO Term Analysis Type e-value
calcium ion binding SMART molecular function 5.9E-7
protein binding Pfam molecular function 9.1E-14

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