Aniseed - Gene card

Gene Card

Best human hits

PITX1; PITX2; PITX3

Species

C.savignyi

Unique Gene ID

Cisavi.g00002678

Gene Model ID

Cisavi.CG.ENS81.R155.584295-597130

Location

R155:584294..597130

Transcript Models and Sequences

Cisavi.CG.ENS81.R155.584295-597130.09227.t
Cisavi.CG.ENS81.R155.584295-597130.09228.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term	Analysis	Definition
Homeobox_dom	CDD	Homeobox domain
Homeobox-like_sf	SUPERFAMILY	Homeobox-like domain superfamily
OAR_dom	Pfam	OAR domain
Homeobox_Pitx/unc30	PIRSF	Homeobox protein Pitx/unc30
Homeobox_dom	SMART	Homeobox domain
OAR_dom	ProSiteProfiles	OAR domain
Homeobox_dom	Pfam	Homeobox domain
Homeobox_CS	ProSitePatterns	Homeobox, conserved site
Homeobox_dom	ProSiteProfiles	Homeobox domain

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

80 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
transcription regulatory region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
RNA polymerase II transcription factor binding	Hs	molecular function
RNA polymerase II activating transcription factor binding	Hs	molecular function
RNA polymerase II transcription coactivator activity	Hs	molecular function
transcriptional activator activity, RNA polymerase II transcription factor binding	Hs	molecular function
skeletal system development	Hs	biological process
branching involved in blood vessel morphogenesis	Hs	biological process
vasculogenesis	Hs	biological process
neuron migration	Hs	biological process
extraocular skeletal muscle development	Hs	biological process
lens development in camera-type eye	Hs	biological process
lens morphogenesis in camera-type eye	Hs	biological process
atrioventricular valve development	Hs	biological process
DNA binding	Hs	molecular function
chromatin binding	Hs	molecular function
transcription factor activity, sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
transcription factor complex	Hs	cellular component
nucleolus	Hs	cellular component
cytoplasm	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
transcription from RNA polymerase II promoter	Hs	biological process
multicellular organism development	Hs	biological process
determination of left/right symmetry	Hs	biological process
brain development	Hs	biological process
heart development	Hs	biological process
skeletal muscle tissue development	Hs	biological process
myoblast fusion	Hs	biological process
aging	Hs	biological process
locomotory behavior	Hs	biological process
transcription factor binding	Hs	molecular function
male gonad development	Hs	biological process
female gonad development	Hs	biological process
anatomical structure morphogenesis	Hs	biological process
response to hormone	Hs	biological process
animal organ morphogenesis	Hs	biological process
regulation of gene expression	Hs	biological process
branchiomeric skeletal muscle development	Hs	biological process
Wnt signaling pathway	Hs	biological process
hypothalamus cell migration	Hs	biological process
pituitary gland development	Hs	biological process
neuron differentiation	Hs	biological process
lung development	Hs	biological process
regulation of cell migration	Hs	biological process
midbrain development	Hs	biological process
embryonic camera-type eye development	Hs	biological process
chromatin DNA binding	Hs	molecular function
embryonic hindlimb morphogenesis	Hs	biological process
hair cell differentiation	Hs	biological process
regulation of cell proliferation	Hs	biological process
response to cocaine	Hs	biological process
odontogenesis	Hs	biological process
camera-type eye development	Hs	biological process
neuronal cell body	Hs	cellular component
positive regulation of DNA binding	Hs	biological process
positive regulation of neuron apoptotic process	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
negative regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription, DNA-templated	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
embryonic digestive tract morphogenesis	Hs	biological process
neuron development	Hs	biological process
cardiac muscle tissue development	Hs	biological process
negative regulation of neurogenesis	Hs	biological process
cartilage development	Hs	biological process
cardiac muscle cell differentiation	Hs	biological process
ventricular cardiac muscle cell development	Hs	biological process
digestive system development	Hs	biological process
endodermal digestive tract morphogenesis	Hs	biological process
iris morphogenesis	Hs	biological process
lens fiber cell differentiation	Hs	biological process
left/right axis specification	Hs	biological process
dopaminergic neuron differentiation	Hs	biological process

GO (Blast)

21 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
transcription regulatory region sequence-specific DNA binding	Hs	molecular function	217	5.43e-67
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	217	5.43e-67
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	217	5.43e-67
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	217	5.43e-67
RNA polymerase II transcription factor binding	Hs	molecular function	182	8.73e-54
RNA polymerase II activating transcription factor binding	Hs	molecular function	217	5.43e-67
RNA polymerase II transcription coactivator activity	Hs	molecular function	217	5.43e-67
transcriptional activator activity, RNA polymerase II transcription factor binding	Hs	molecular function	182	8.73e-54
DNA binding	Hs	molecular function	217	5.43e-67
chromatin binding	Hs	molecular function	217	5.43e-67
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	217	5.43e-67
protein binding	Hs	molecular function	217	5.43e-67
nucleus	Hs	cellular component	217	5.43e-67
nucleoplasm	Hs	cellular component	217	5.43e-67
transcription factor complex	Hs	cellular component	217	5.43e-67
nucleolus	Hs	cellular component	182	8.73e-54
cytoplasm	Hs	cellular component	217	5.43e-67
transcription factor binding	Hs	molecular function	217	5.43e-67
chromatin DNA binding	Hs	molecular function	217	5.43e-67
neuronal cell body	Hs	cellular component	183	2.05e-54
sequence-specific DNA binding	Hs	molecular function	217	5.43e-67

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
DNA binding	SMART	molecular function	4.1E-25
transcription factor activity, sequence-specific DNA binding	PIRSF	molecular function	3.4E-120
regulation of transcription, DNA-templated	ProSitePatterns	biological process
sequence-specific DNA binding	ProSitePatterns	molecular function