Aniseed - Gene card

Gene Card

Best human hits

RPS27A; UBB; UBC

Species

C.savignyi

Unique Gene ID

Cisavi.g00002808

Gene Model ID

Cisavi.CG.ENS81.R16.1473434-1481523

Location

R16:1473433..1481523

Transcript Models and Sequences

Cisavi.CG.ENS81.R16.1473434-1481523.12528.t
Cisavi.CG.ENS81.R16.1473434-1481523.12529.t
Cisavi.CG.ENS81.R16.1473434-1481523.12530.t
Cisavi.CG.ENS81.R16.1473434-1481523.12531.t
Cisavi.CG.ENS81.R16.1473434-1481523.12532.t
Cisavi.CG.ENS81.R16.1473434-1481523.12533.t
Cisavi.CG.ENS81.R16.1473434-1481523.12534.t
Cisavi.CG.ENS81.R16.1473434-1481523.12535.t
Cisavi.CG.ENS81.R16.1473434-1481523.12536.t
Cisavi.CG.ENS81.R16.1473434-1481523.12537.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
Ubiquitin-like_domsf	SUPERFAMILY	Ubiquitin-like domain superfamily
Ubiquitin_dom	SMART	Ubiquitin domain
Ubiquitin_CS	ProSitePatterns	Ubiquitin conserved site
Ubiquitin_dom	Pfam	Ubiquitin domain
Ubiquitin	PRINTS	Ubiquitin
Ubiquitin_dom	ProSiteProfiles	Ubiquitin domain

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

89 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
G2/M transition of mitotic cell cycle	Hs	biological process
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
MAPK cascade	Hs	biological process
activation of MAPK activity	Hs	biological process
protein polyubiquitination	Hs	biological process
nucleotide-excision repair, DNA damage recognition	Hs	biological process
protease binding	Hs	molecular function
MyD88-dependent toll-like receptor signaling pathway	Hs	biological process
MyD88-independent toll-like receptor signaling pathway	Hs	biological process
RNA binding	Hs	molecular function
protein binding	Hs	molecular function
extracellular space	Hs	cellular component
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
mitochondrion	Hs	cellular component
mitochondrial outer membrane	Hs	cellular component
endoplasmic reticulum membrane	Hs	cellular component
cytosol	Hs	cellular component
plasma membrane	Hs	cellular component
glycogen biosynthetic process	Hs	biological process
transcription-coupled nucleotide-excision repair	Hs	biological process
nucleotide-excision repair, DNA incision, 5'-to lesion	Hs	biological process
nucleotide-excision repair, DNA gap filling	Hs	biological process
protein folding	Hs	biological process
cellular iron ion homeostasis	Hs	biological process
transforming growth factor beta receptor signaling pathway	Hs	biological process
Notch signaling pathway	Hs	biological process
I-kappaB kinase/NF-kappaB signaling	Hs	biological process
JNK cascade	Hs	biological process
fibroblast growth factor receptor signaling pathway	Hs	biological process
endosome membrane	Hs	cellular component
negative regulation of G2/M transition of mitotic cell cycle	Hs	biological process
Wnt signaling pathway	Hs	biological process
endosomal transport	Hs	biological process
macroautophagy	Hs	biological process
protein ubiquitination	Hs	biological process
protein deubiquitination	Hs	biological process
cytokine-mediated signaling pathway	Hs	biological process
translesion synthesis	Hs	biological process
negative regulation of transforming growth factor beta receptor signaling pathway	Hs	biological process
endocytic vesicle membrane	Hs	cellular component
anaphase-promoting complex-dependent catabolic process	Hs	biological process
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	Hs	biological process
positive regulation of protein ubiquitination	Hs	biological process
vesicle	Hs	cellular component
negative regulation of type I interferon production	Hs	biological process
tumor necrosis factor-mediated signaling pathway	Hs	biological process
nucleotide-excision repair, DNA incision	Hs	biological process
ion transmembrane transport	Hs	biological process
TRIF-dependent toll-like receptor signaling pathway	Hs	biological process
interstrand cross-link repair	Hs	biological process
NIK/NF-kappaB signaling	Hs	biological process
Fc-epsilon receptor signaling pathway	Hs	biological process
negative regulation of epidermal growth factor receptor signaling pathway	Hs	biological process
error-prone translesion synthesis	Hs	biological process
DNA damage response, detection of DNA damage	Hs	biological process
neuron projection	Hs	cellular component
neuronal cell body	Hs	cellular component
positive regulation of apoptotic process	Hs	biological process
negative regulation of apoptotic process	Hs	biological process
positive regulation of I-kappaB kinase/NF-kappaB signaling	Hs	biological process
proteasome-mediated ubiquitin-dependent protein catabolic process	Hs	biological process
myelin sheath	Hs	cellular component
regulation of mRNA stability	Hs	biological process
host cell	Hs	cellular component
endoplasmic reticulum quality control compartment	Hs	cellular component
innate immune response	Hs	biological process
positive regulation of epidermal growth factor receptor signaling pathway	Hs	biological process
negative regulation of Notch signaling pathway	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
mitochondrion transport along microtubule	Hs	biological process
neuron projection morphogenesis	Hs	biological process
T cell receptor signaling pathway	Hs	biological process
positive regulation of NF-kappaB transcription factor activity	Hs	biological process
stress-activated MAPK cascade	Hs	biological process
negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle	Hs	biological process
regulation of mitochondrial membrane potential	Hs	biological process
transmembrane transport	Hs	biological process
Wnt signaling pathway, planar cell polarity pathway	Hs	biological process
membrane organization	Hs	biological process
regulation of proteasomal protein catabolic process	Hs	biological process
extracellular exosome	Hs	cellular component
interleukin-1-mediated signaling pathway	Hs	biological process
negative regulation of canonical Wnt signaling pathway	Hs	biological process
positive regulation of canonical Wnt signaling pathway	Hs	biological process
regulation of neuron death	Hs	biological process
regulation of hematopoietic stem cell differentiation	Hs	biological process
positive regulation of intrinsic apoptotic signaling pathway by p53 class mediator	Hs	biological process

GO (Blast)

29 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protease binding	Hs	molecular function	1284	0.0
RNA binding	Hs	molecular function	1284	0.0
structural constituent of ribosome	Hs	molecular function	149	5.79e-42
protein binding	Hs	molecular function	1284	0.0
extracellular space	Hs	cellular component	1284	0.0
nucleus	Hs	cellular component	1284	0.0
nucleoplasm	Hs	cellular component	1284	0.0
nucleolus	Hs	cellular component	149	5.79e-42
cytoplasm	Hs	cellular component	1284	0.0
mitochondrion	Hs	cellular component	434	1.46e-149
mitochondrial outer membrane	Hs	cellular component	1284	0.0
endoplasmic reticulum membrane	Hs	cellular component	1284	0.0
cytosol	Hs	cellular component	1284	0.0
ribosome	Hs	cellular component	149	5.79e-42
plasma membrane	Hs	cellular component	1284	0.0
endosome membrane	Hs	cellular component	1284	0.0
small ribosomal subunit	Hs	cellular component	149	5.79e-42
membrane	Hs	cellular component	149	5.79e-42
cytosolic small ribosomal subunit	Hs	cellular component	149	5.79e-42
intracellular ribonucleoprotein complex	Hs	cellular component	149	5.79e-42
endocytic vesicle membrane	Hs	cellular component	1284	0.0
vesicle	Hs	cellular component	1284	0.0
neuron projection	Hs	cellular component	434	1.46e-149
neuronal cell body	Hs	cellular component	434	1.46e-149
myelin sheath	Hs	cellular component	1284	0.0
host cell	Hs	cellular component	1284	0.0
endoplasmic reticulum quality control compartment	Hs	cellular component	1284	0.0
metal ion binding	Hs	molecular function	149	5.79e-42
extracellular exosome	Hs	cellular component	1284	0.0

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	SMART	molecular function	4.9E-34