Login
Help

GENE CARD

Submit your Data

  1. > 
  2. > 
  3. Gene 'Moocul.CG.ELv1_2.S11...' > 

Gene Card

Best human hits

SEC23A; SEC23B; SEC24B

Species

C.savignyi

Unique Gene ID

Cisavi.g00002977

Gene Model ID

Cisavi.CG.ENS81.R16.3647651-3657400

Location

R16:3647650..3657400

Transcript Models and Sequences

  Cisavi.CG.ENS81.R16.3647651-3657400.19570.t
Cisavi.CG.ENS81.R16.3647651-3657400.19571.t
Cisavi.CG.ENS81.R16.3647651-3657400.19572.t
Cisavi.CG.ENS81.R16.3647651-3657400.19573.t
Cisavi.CG.ENS81.R16.3647651-3657400.19574.t
Cisavi.CG.ENS81.R16.3647651-3657400.19575.t
Cisavi.CG.ENS81.R16.3647651-3657400.19576.t
Cisavi.CG.ENS81.R16.3647651-3657400.19577.t
Cisavi.CG.ENS81.R16.3647651-3657400.19578.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

13 results

IPR Term Analysis Definition
Gelsolin-like_dom_sf SUPERFAMILY Gelsolin-like domain superfamily
Sec23 PANTHER Protein transport protein Sec23
vWFA_dom_sf SUPERFAMILY von Willebrand factor A-like domain superfamily
Sec23/24_trunk_dom Pfam Sec23/Sec24, trunk domain
Znf_Sec23_Sec24 Pfam Zinc finger, Sec23/Sec24-type
Sec23/24_helical_dom Pfam Sec23/Sec24, helical domain
Znf_Sec23_Sec24_sf SUPERFAMILY Zinc finger, Sec23/Sec24-type superfamily
Sec23_24_beta_S Pfam Sec23/Sec24 beta-sandwich
Sec23/24_helical_dom_sf SUPERFAMILY Sec23/Sec24 helical domain superfamily
ADF-H/Gelsolin-like_dom_sf Gene3D ADF-H/Gelsolin-like domain superfamily
vWFA_dom_sf Gene3D von Willebrand factor A-like domain superfamily
Gelsolin-like_dom Pfam Gelsolin-like domain
Sec23_C CDD Sec23, C-terminal

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
Golgi membrane Hs cellular component
antigen processing and presentation of peptide antigen via MHC class I Hs biological process
protein binding Hs molecular function
cytoplasm Hs cellular component
endoplasmic reticulum Hs cellular component
endoplasmic reticulum membrane Hs cellular component
cytosol Hs cellular component
intracellular protein transport Hs biological process
ER to Golgi vesicle-mediated transport Hs biological process
zinc ion binding Hs molecular function
endomembrane system Hs cellular component
ER to Golgi transport vesicle membrane Hs cellular component
protein transport Hs biological process
membrane Hs cellular component
vesicle-mediated transport Hs biological process
antigen processing and presentation of exogenous peptide antigen via MHC class II Hs biological process
extrinsic component of membrane Hs cellular component
COPII vesicle coat Hs cellular component
COPII-coated ER to Golgi transport vesicle Hs cellular component
cytoplasmic vesicle Hs cellular component
metal ion binding Hs molecular function
COPII vesicle coating Hs biological process
perinuclear region of cytoplasm Hs cellular component
endoplasmic reticulum exit site Hs cellular component
cargo loading into COPII-coated vesicle Hs biological process
COPII-coated vesicle budding Hs biological process

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
Golgi membrane Hs cellular component 1220 0.0
protein binding Hs molecular function 1220 0.0
cytoplasm Hs cellular component 1220 0.0
endoplasmic reticulum Hs cellular component 1220 0.0
endoplasmic reticulum membrane Hs cellular component 1220 0.0
cytosol Hs cellular component 1220 0.0
zinc ion binding Hs molecular function 1220 0.0
endomembrane system Hs cellular component 1180 0.0
ER to Golgi transport vesicle membrane Hs cellular component 1220 0.0
membrane Hs cellular component 1220 0.0
extrinsic component of membrane Hs cellular component 1220 0.0
COPII vesicle coat Hs cellular component 1220 0.0
COPII-coated ER to Golgi transport vesicle Hs cellular component 1220 0.0
cytoplasmic vesicle Hs cellular component 1220 0.0
metal ion binding Hs molecular function 1220 0.0
perinuclear region of cytoplasm Hs cellular component 1220 0.0
endoplasmic reticulum exit site Hs cellular component 1220 0.0

GO (InterProScan)

5 results

GO Term Analysis Type e-value
intracellular protein transport SUPERFAMILY biological process 1.83E-42
ER to Golgi vesicle-mediated transport SUPERFAMILY biological process 1.83E-42
zinc ion binding SUPERFAMILY molecular function 4.45E-20
COPII vesicle coat Pfam cellular component 4.2E-70
COPII-coated vesicle budding CDD biological process 4.72354E-78

Back to Top