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GENE CARD

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Gene Card

Best human hits

BARX2; DBX1; HLX

Species

C.savignyi

Unique Gene ID

Cisavi.g00002992

Gene Model ID

Cisavi.CG.ENS81.R16.3800525-3804377

Location

R16:3800524..3804377

Transcript Models and Sequences

  Cisavi.CG.ENS81.R16.3800525-3804377.19704.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
Homeobox_dom Pfam Homeobox domain
Homeobox_CS ProSitePatterns Homeobox, conserved site
Homeobox_metazoa PRINTS Homeobox domain, metazoa
Homeobox-like_sf SUPERFAMILY Homeobox-like domain superfamily
Homeobox_dom CDD Homeobox domain
HTH_motif PRINTS Helix-turn-helix motif
Homeobox_dom SMART Homeobox domain
Homeobox_dom ProSiteProfiles Homeobox domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 75.9 3.11e-15
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 100 1.60e-22
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 75.9 3.11e-15
DNA binding Hs molecular function 100 1.60e-22
chromatin binding Hs molecular function 75.9 3.11e-15
transcription factor activity, sequence-specific DNA binding Hs molecular function 75.9 3.11e-15
protein binding Hs molecular function 100 1.60e-22
nucleus Hs cellular component 100 1.60e-22
nucleoplasm Hs cellular component 75.9 3.11e-15
transcription factor complex Hs cellular component 75.9 3.11e-15
cytosol Hs cellular component 75.9 3.11e-15
sequence-specific DNA binding Hs molecular function 100 1.60e-22

GO (InterProScan)

3 results

GO Term Analysis Type e-value
DNA binding SUPERFAMILY molecular function 2.61E-18
regulation of transcription, DNA-templated ProSitePatterns biological process
sequence-specific DNA binding ProSitePatterns molecular function