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GENE CARD

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  1. Gene 'Boschl.CG.Botznik201...'

Gene Card

Best human hits

TBX2; TBX3; TBX4

Species

C.savignyi

Unique Gene ID

Cisavi.g00003123

Gene Model ID

Cisavi.CG.ENS81.R16.5024637-5036944

Location

R16:5024636..5036944

Transcript Models and Sequences

  Cisavi.CG.ENS81.R16.5024637-5036944.20051.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term Analysis Definition
TF_T-box_CS ProSitePatterns Transcription factor, T-box, conserved site
TF_T-box ProSiteProfiles Transcription factor, T-box
TF_T-box SMART Transcription factor, T-box
TF_T-box Pfam Transcription factor, T-box
TF_T-box PANTHER Transcription factor, T-box
p53-like_TF_DNA-bd SUPERFAMILY p53-like transcription factor, DNA-binding
TF_Brachyury PRINTS Transcription factor, Brachyury
T-box_sf Gene3D T-box superfamily
TF_T-box PRINTS Transcription factor, T-box

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 167 9.28e-49
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 167 9.28e-49
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 167 9.28e-49
RNA polymerase II transcription factor binding Hs molecular function 165 6.16e-48
RNA polymerase II activating transcription factor binding Hs molecular function 165 6.16e-48
DNA binding Hs molecular function 167 9.28e-49
transcription factor activity, sequence-specific DNA binding Hs molecular function 167 9.28e-49
protein binding Hs molecular function 167 9.28e-49
nucleus Hs cellular component 167 9.28e-49
transcription factor complex Hs cellular component 167 9.28e-49
sequence-specific DNA binding Hs molecular function 167 9.28e-49

GO (InterProScan)

3 results

GO Term Analysis Type e-value
transcription factor activity, sequence-specific DNA binding PANTHER molecular function 1.1E-96
nucleus PANTHER cellular component 1.1E-96
regulation of transcription, DNA-templated PANTHER biological process 1.1E-96