Login
Help

GENE CARD

Submit your Data

  1. > 
  2. > 
  3. > 
  4. > 

Gene Card

Best human hits

EIF4A1; EIF4A2; EIF4A3

Species

C.savignyi

Unique Gene ID

Cisavi.g00003211

Gene Model ID

Cisavi.CG.ENS81.R162.92333-96466

Location

R162:92332..96466

Transcript Models and Sequences

  Cisavi.CG.ENS81.R162.92333-96466.01141.t
Cisavi.CG.ENS81.R162.92333-96466.01142.t
Cisavi.CG.ENS81.R162.92333-96466.01143.t
Cisavi.CG.ENS81.R162.92333-96466.01144.t
Cisavi.CG.ENS81.R162.92333-96466.01145.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

11 results

IPR Term Analysis Definition
RNA-helicase_DEAD-box_CS ProSitePatterns ATP-dependent RNA helicase DEAD-box, conserved site
Helicase_C Pfam Helicase, C-terminal
EIF4A PANTHER Eukaryotic initiation factor 4A
Helicase_C ProSiteProfiles Helicase, C-terminal
Helicase_C SMART Helicase, C-terminal
DEAD/DEAH_box_helicase_dom Pfam DEAD/DEAH box helicase domain
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Helicase_C CDD Helicase, C-terminal
RNA_helicase_DEAD_Q_motif ProSiteProfiles RNA helicase, DEAD-box type, Q motif
Helicase_ATP-bd ProSiteProfiles Helicase superfamily 1/2, ATP-binding domain
Helicase_ATP-bd SMART Helicase superfamily 1/2, ATP-binding domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

28 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
nucleotide binding Hs molecular function
nuclear-transcribed mRNA poly(A) tail shortening Hs biological process
RNA cap binding Hs molecular function
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
double-stranded RNA binding Hs molecular function
mRNA binding Hs molecular function
translation initiation factor activity Hs molecular function
ATP-dependent RNA helicase activity Hs molecular function
helicase activity Hs molecular function
protein binding Hs molecular function
ATP binding Hs molecular function
nucleolus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
translation Hs biological process
translational initiation Hs biological process
regulation of translational initiation Hs biological process
translation factor activity, RNA binding Hs molecular function
regulation of gene expression Hs biological process
RNA secondary structure unwinding Hs biological process
membrane Hs cellular component
viral process Hs biological process
eukaryotic translation initiation factor 4F complex Hs cellular component
hydrolase activity Hs molecular function
ATPase activity Hs molecular function
perinuclear region of cytoplasm Hs cellular component
extracellular exosome Hs cellular component

GO (Blast)

34 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nucleotide binding Hs molecular function 632 0.0
RNA cap binding Hs molecular function 632 0.0
nucleic acid binding Hs molecular function 632 0.0
RNA binding Hs molecular function 632 0.0
double-stranded RNA binding Hs molecular function 632 0.0
mRNA binding Hs molecular function 632 0.0
translation initiation factor activity Hs molecular function 632 0.0
ATP-dependent RNA helicase activity Hs molecular function 632 0.0
helicase activity Hs molecular function 632 0.0
protein binding Hs molecular function 632 0.0
ATP binding Hs molecular function 632 0.0
nucleus Hs cellular component 550 0.0
nucleoplasm Hs cellular component 550 0.0
spliceosomal complex Hs cellular component 550 0.0
nucleolus Hs cellular component 630 0.0
cytoplasm Hs cellular component 632 0.0
cytosol Hs cellular component 632 0.0
translation factor activity, RNA binding Hs molecular function 632 0.0
poly(A) binding Hs molecular function 550 0.0
membrane Hs cellular component 632 0.0
eukaryotic translation initiation factor 4F complex Hs cellular component 632 0.0
nuclear speck Hs cellular component 550 0.0
hydrolase activity Hs molecular function 632 0.0
ATPase activity Hs molecular function 630 0.0
dendrite Hs cellular component 550 0.0
intracellular ribonucleoprotein complex Hs cellular component 550 0.0
exon-exon junction complex Hs cellular component 550 0.0
selenocysteine insertion sequence binding Hs molecular function 550 0.0
RNA stem-loop binding Hs molecular function 550 0.0
ribonucleoprotein complex binding Hs molecular function 550 0.0
neuronal cell body Hs cellular component 550 0.0
perinuclear region of cytoplasm Hs cellular component 630 0.0
extracellular exosome Hs cellular component 632 0.0
catalytic step 2 spliceosome Hs cellular component 550 0.0

GO (InterProScan)

4 results

GO Term Analysis Type e-value
nucleic acid binding Pfam molecular function 2.2E-46
translation initiation factor activity PANTHER molecular function 1.8E-193
ATP-dependent RNA helicase activity PANTHER molecular function 1.8E-193
ATP binding Pfam molecular function 2.2E-46

Back to Top