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GENE CARD

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Gene Card

Best human hits

ZFP36; ZFP36L1; ZFP36L2

Species

C.savignyi

Unique Gene ID

Cisavi.g00003276

Gene Model ID

Cisavi.CG.ENS81.R167.324353-325773

Location

R167:324352..325773

Transcript Models and Sequences

  Cisavi.CG.ENS81.R167.324353-325773.04977.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Znf_CCCH_sf SUPERFAMILY Zinc finger, CCCH-type superfamily
Znf_CCCH ProSiteProfiles Zinc finger, CCCH-type
Znf_CCCH Pfam Zinc finger, CCCH-type
Znf_CCCH SMART Zinc finger, CCCH-type

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

18 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
P-body Hs cellular component 166 1.56e-48
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 166 1.56e-48
DNA binding Hs molecular function 166 1.56e-48
transcription factor activity, sequence-specific DNA binding Hs molecular function 166 1.56e-48
RNA binding Hs molecular function 166 1.56e-48
mRNA binding Hs molecular function 166 1.56e-48
protein binding Hs molecular function 166 1.56e-48
nucleus Hs cellular component 166 1.56e-48
cytoplasm Hs cellular component 166 1.56e-48
cytosol Hs cellular component 166 1.56e-48
AU-rich element binding Hs molecular function 166 1.56e-48
CCR4-NOT complex Hs cellular component 112 5.01e-28
intracellular ribonucleoprotein complex Hs cellular component 166 1.56e-48
mRNA 3'-UTR AU-rich region binding Hs molecular function 166 1.56e-48
metal ion binding Hs molecular function 166 1.56e-48
RNA polymerase binding Hs molecular function 112 5.01e-28
14-3-3 protein binding Hs molecular function 166 1.56e-48
ribonucleoprotein complex Hs cellular component 112 5.01e-28

GO (InterProScan)

1 result

GO Term Analysis Type e-value
metal ion binding Pfam molecular function 4.7E-11