Aniseed - Gene card

Gene Card

Best human hits

ZNF160; ZNF347; ZNF84

Species

C.savignyi

Unique Gene ID

Cisavi.g00003505

Gene Model ID

Cisavi.CG.ENS81.R173.20691-36878

Location

R173:20690..36878

Transcript Models and Sequences

Cisavi.CG.ENS81.R173.20691-36878.11495.t
Cisavi.CG.ENS81.R173.20691-36878.11496.t
Cisavi.CG.ENS81.R173.20691-36878.11497.t
Cisavi.CG.ENS81.R173.20691-36878.11498.t
Cisavi.CG.ENS81.R173.20691-36878.11499.t
Cisavi.CG.ENS81.R173.20691-36878.11500.t
Cisavi.CG.ENS81.R173.20691-36878.11501.t
Cisavi.CG.ENS81.R173.20691-36878.11502.t

External Database Gene Card

External database links

No result

Collections

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Znf_C2H2_sf	SUPERFAMILY	Zinc finger C2H2 superfamily
Znf_C2H2_type	ProSitePatterns	Zinc finger C2H2-type
Znf_C2H2_type	SMART	Zinc finger C2H2-type
Znf_C2H2_type	ProSiteProfiles	Zinc finger C2H2-type

GOSlim

No result

GO Term	Annotation Origin	Type

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

7 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	340	1.34e-108
nucleic acid binding	Hs	molecular function	340	1.34e-108
DNA binding	Hs	molecular function	340	1.34e-108
intracellular	Hs	cellular component	340	1.34e-108
nucleus	Hs	cellular component	340	1.34e-108
zinc ion binding	Hs	molecular function	329	3.34e-105
metal ion binding	Hs	molecular function	340	1.34e-108

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
nucleic acid binding	SMART	molecular function	7.3E-4