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GENE CARD

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Gene Card

Best human hits

G2E3; PHF6; PHF7

Species

C.savignyi

Unique Gene ID

Cisavi.g00003650

Gene Model ID

Cisavi.CG.ENS81.R19.1654786-1658085

Location

R19:1654785..1658085

Transcript Models and Sequences

  Cisavi.CG.ENS81.R19.1654786-1658085.14774.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
Znf_RING/FYVE/PHD Gene3D Zinc finger, RING/FYVE/PHD-type
Znf_FYVE_PHD SUPERFAMILY Zinc finger, FYVE/PHD-type
Znf_RING ProSiteProfiles Zinc finger, RING-type
Znf_PHD SMART Zinc finger, PHD-type
EPHD ProSiteProfiles Extended PHD (ePHD) domain

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
Golgi apparatus Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
nuclear speck Hs cellular component
metal ion binding Hs molecular function

GO (Blast)

28 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
chromosome, centromeric region Hs cellular component 69.7 5.60e-13
kinetochore Hs cellular component 69.7 5.60e-13
condensed chromosome kinetochore Hs cellular component 69.7 5.60e-13
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 69.7 5.60e-13
DNA binding Hs molecular function 69.7 5.60e-13
RNA binding Hs molecular function 69.7 5.60e-13
ubiquitin-protein transferase activity Hs molecular function 246 1.28e-74
protein binding Hs molecular function 246 1.28e-74
nucleus Hs cellular component 246 1.28e-74
nucleoplasm Hs cellular component 213 3.70e-65
chromosome Hs cellular component 69.7 5.60e-13
nucleolus Hs cellular component 246 1.28e-74
cytoplasm Hs cellular component 246 1.28e-74
Golgi apparatus Hs cellular component 213 3.70e-65
cytosol Hs cellular component 246 1.28e-74
plasma membrane Hs cellular component 213 3.70e-65
tubulin binding Hs molecular function 69.7 5.60e-13
nuclear speck Hs cellular component 213 3.70e-65
transferase activity Hs molecular function 246 1.28e-74
enzyme binding Hs molecular function 69.7 5.60e-13
histone binding Hs molecular function 69.7 5.60e-13
histone deacetylase binding Hs molecular function 69.7 5.60e-13
ribonucleoprotein complex binding Hs molecular function 69.7 5.60e-13
intracellular membrane-bounded organelle Hs cellular component 246 1.28e-74
sequence-specific DNA binding Hs molecular function 69.7 5.60e-13
metal ion binding Hs molecular function 246 1.28e-74
phosphoprotein binding Hs molecular function 69.7 5.60e-13
scaffold protein binding Hs molecular function 69.7 5.60e-13

GO (InterProScan)

No result

GO Term Analysis Type e-value