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GENE CARD

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  1. Gene 'Cisavi.CG.ENS81.R19....'

Gene Card

Best human hits

HAGH; LACTB2; PNKD

Species

C.savignyi

Unique Gene ID

Cisavi.g00003777

Gene Model ID

Cisavi.CG.ENS81.R19.315302-316896

Location

R19:315301..316896

Transcript Models and Sequences

  Cisavi.CG.ENS81.R19.315302-316896.10253.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
WH-like_DNA-bd_sf Gene3D Winged helix-like DNA-binding domain superfamily
Metallo-B-lactamas Pfam Metallo-beta-lactamase
Metallo-B-lactamas SMART Metallo-beta-lactamase
RibonucZ/Hydroxyglut_hydro SUPERFAMILY Ribonuclease Z/Hydroxyacylglutathione hydrolase-like
RibonucZ/Hydroxyglut_hydro Gene3D Ribonuclease Z/Hydroxyacylglutathione hydrolase-like

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

12 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
RNA binding Hs molecular function
single-stranded RNA binding Hs molecular function
nuclease activity Hs molecular function
endonuclease activity Hs molecular function
endoribonuclease activity Hs molecular function
protein binding Hs molecular function
mitochondrion Hs cellular component
mitochondrial matrix Hs cellular component
zinc ion binding Hs molecular function
hydrolase activity Hs molecular function
metal ion binding Hs molecular function
RNA phosphodiester bond hydrolysis, endonucleolytic Hs biological process

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 304 7.56e-104
single-stranded RNA binding Hs molecular function 304 7.56e-104
hydroxyacylglutathione hydrolase activity Hs molecular function 54.7 1.56e-08
nuclease activity Hs molecular function 304 7.56e-104
endonuclease activity Hs molecular function 304 7.56e-104
endoribonuclease activity Hs molecular function 304 7.56e-104
protein binding Hs molecular function 304 7.56e-104
nucleus Hs cellular component 54.7 1.56e-08
cytoplasm Hs cellular component 54.7 1.56e-08
mitochondrion Hs cellular component 304 7.56e-104
mitochondrial matrix Hs cellular component 304 7.56e-104
cytosol Hs cellular component 45.8 1.19e-05
zinc ion binding Hs molecular function 304 7.56e-104
membrane Hs cellular component 54.7 1.56e-08
hydrolase activity Hs molecular function 304 7.56e-104
metal ion binding Hs molecular function 304 7.56e-104
extracellular exosome Hs cellular component 45.8 1.19e-05

GO (InterProScan)

No result

GO Term Analysis Type e-value