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GENE CARD

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Gene Card

Best human hits

FTSJ1; FTSJ3; MRM2

Species

C.savignyi

Unique Gene ID

Cisavi.g00003781

Gene Model ID

Cisavi.CG.ENS81.R19.3189315-3194764

Location

R19:3189314..3194764

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
rRNA_MeTrfase_FtsJ_dom Pfam Ribosomal RNA methyltransferase FtsJ domain
RNA_methyltr_E_Trm7 PANTHER tRNA (cytidine(32)/guanosine(34)-2-O)-methyltransferase, Trm7
RNA_methyltr_E_Trm7 Hamap tRNA (cytidine(32)/guanosine(34)-2-O)-methyltransferase, Trm7
rRNA-MeTfrase_E Hamap Ribosomal RNA large subunit methyltransferase E
SAM-dependent_MTases SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferase

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

13 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
RNA methylation Hs biological process
cytoplasmic translation Hs biological process
cytoplasm Hs cellular component
cytosol Hs cellular component
tRNA modification Hs biological process
tRNA processing Hs biological process
methyltransferase activity Hs molecular function
tRNA methyltransferase activity Hs molecular function
tRNA (guanosine-2'-O-)-methyltransferase activity Hs molecular function
transferase activity Hs molecular function
tRNA methylation Hs biological process
methylation Hs biological process
tRNA (cytosine-2'-O-)-methyltransferase activity Hs molecular function

GO (Blast)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
RNA binding Hs molecular function 143 4.14e-38
protein binding Hs molecular function 143 4.14e-38
nucleus Hs cellular component 143 4.14e-38
nucleolus Hs cellular component 143 4.14e-38
cytoplasm Hs cellular component 403 5.75e-142
mitochondrion Hs cellular component 107 1.30e-27
mitochondrial matrix Hs cellular component 107 1.30e-27
cytosol Hs cellular component 403 5.75e-142
methyltransferase activity Hs molecular function 403 5.75e-142
tRNA methyltransferase activity Hs molecular function 403 5.75e-142
rRNA methyltransferase activity Hs molecular function 143 4.14e-38
rRNA (uridine-2'-O-)-methyltransferase activity Hs molecular function 143 4.14e-38
tRNA (guanosine-2'-O-)-methyltransferase activity Hs molecular function 403 5.75e-142
rRNA (guanine) methyltransferase activity Hs molecular function 143 4.14e-38
transferase activity Hs molecular function 403 5.75e-142
preribosome, large subunit precursor Hs cellular component 143 4.14e-38
tRNA (cytosine-2'-O-)-methyltransferase activity Hs molecular function 403 5.75e-142

GO (InterProScan)

5 results

GO Term Analysis Type e-value
RNA methylation Hamap biological process 32.868
tRNA processing PANTHER biological process 1.8E-38
methyltransferase activity Pfam molecular function 3.4E-8
tRNA methyltransferase activity PANTHER molecular function 1.8E-38
methylation Pfam biological process 3.4E-8