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  2. Gene 'Moocci.CG.ELv1_2.S48...' > 

Gene Card

Best human hits

ITGB1; ITGB6; ITGB7

Species

C.savignyi

Unique Gene ID

Cisavi.g00004516

Gene Model ID

Cisavi.CG.ENS81.R215.380006-398932

Location

R215:380005..398932

Transcript Models and Sequences

  Cisavi.CG.ENS81.R215.380006-398932.05663.t
Cisavi.CG.ENS81.R215.380006-398932.05664.t
Cisavi.CG.ENS81.R215.380006-398932.05665.t
Cisavi.CG.ENS81.R215.380006-398932.05666.t
Cisavi.CG.ENS81.R215.380006-398932.05667.t
Cisavi.CG.ENS81.R215.380006-398932.05668.t
Cisavi.CG.ENS81.R215.380006-398932.05669.t
Cisavi.CG.ENS81.R215.380006-398932.05670.t
Cisavi.CG.ENS81.R215.380006-398932.05671.t
Cisavi.CG.ENS81.R215.380006-398932.05672.t

External Database Gene Card

External database links

No result

Collections
WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

15 results

IPR Term Analysis Definition
Integrin_bsu PIRSF Integrin beta subunit
PSI SMART PSI domain
Integrin_bsu_tail SMART Integrin beta subunit, tail
Integrin_bsu PRINTS Integrin beta subunit
Integrin_bsu_cyt_dom Pfam Integrin beta subunit, cytoplasmic domain
Integrin_dom_sf SUPERFAMILY Integrin domain superfamily
Integrin_bsu_VWA Pfam Integrin beta subunit, VWA domain
Integrin_bsu ProSitePatterns Integrin beta subunit
Integrin_bsu_VWA SMART Integrin beta subunit, VWA domain
vWFA_dom_sf Gene3D von Willebrand factor A-like domain superfamily
vWFA_dom_sf SUPERFAMILY von Willebrand factor A-like domain superfamily
Integrin_bsu_cyt_dom SMART Integrin beta subunit, cytoplasmic domain
Integrin_beta_N Pfam Integrin beta N-terminal
Integrin_bsu PANTHER Integrin beta subunit
Integrin_bsu_tail_dom_sf SUPERFAMILY Integrin beta tail domain superfamily

GOSlim

No result

GO Term Annotation Origin Type

GO (Orthology)

128 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
G1/S transition of mitotic cell cycle Hs biological process
virus receptor activity Hs molecular function
cell fate specification Hs biological process
ruffle Hs cellular component
fibronectin binding Hs molecular function
protease binding Hs molecular function
cell migration involved in sprouting angiogenesis Hs biological process
actin binding Hs molecular function
receptor activity Hs molecular function
integrin binding Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
endosome Hs cellular component
plasma membrane Hs cellular component
focal adhesion Hs cellular component
inflammatory response Hs biological process
cellular defense response Hs biological process
cell adhesion Hs biological process
homophilic cell adhesion via plasma membrane adhesion molecules Hs biological process
cell-matrix adhesion Hs biological process
integrin-mediated signaling pathway Hs biological process
positive regulation of cell proliferation Hs biological process
integrin complex Hs cellular component
germ cell migration Hs biological process
visual learning Hs biological process
external side of plasma membrane Hs cellular component
cell surface Hs cellular component
intercalated disc Hs cellular component
coreceptor activity Hs molecular function
membrane Hs cellular component
integral component of membrane Hs cellular component
viral process Hs biological process
cell migration Hs biological process
cytokine-mediated signaling pathway Hs biological process
C-X3-C chemokine binding Hs molecular function
formation of radial glial scaffolds Hs biological process
lamellipodium Hs cellular component
cell junction Hs cellular component
filopodium Hs cellular component
B cell differentiation Hs biological process
extracellular matrix organization Hs biological process
neuron projection development Hs biological process
cytoplasmic vesicle Hs cellular component
cell-substrate adhesion Hs biological process
neuromuscular junction Hs cellular component
receptor internalization Hs biological process
cleavage furrow Hs cellular component
ruffle membrane Hs cellular component
cell adhesion mediated by integrin Hs biological process
cell-cell adhesion mediated by integrin Hs biological process
substrate adhesion-dependent cell spreading Hs biological process
integrin alpha1-beta1 complex Hs cellular component
integrin alpha2-beta1 complex Hs cellular component
integrin alpha3-beta1 complex Hs cellular component
integrin alpha4-beta7 complex Hs cellular component
integrin alpha7-beta1 complex Hs cellular component
integrin alpha8-beta1 complex Hs cellular component
integrin alpha10-beta1 complex Hs cellular component
integrin alpha11-beta1 complex Hs cellular component
negative regulation of Rho protein signal transduction Hs biological process
myelin sheath abaxonal region Hs cellular component
sarcolemma Hs cellular component
melanosome Hs cellular component
cell projection Hs cellular component
positive regulation of apoptotic process Hs biological process
receptor clustering Hs biological process
dendritic spine Hs cellular component
receptor complex Hs cellular component
laminin binding Hs molecular function
positive regulation of GTPase activity Hs biological process
macromolecular complex binding Hs molecular function
membrane raft Hs cellular component
synapse Hs cellular component
sarcomere organization Hs biological process
cadherin binding Hs molecular function
negative regulation of cell differentiation Hs biological process
positive regulation of angiogenesis Hs biological process
viral entry into host cell Hs biological process
metal ion binding Hs molecular function
protein heterodimerization activity Hs molecular function
mesodermal cell differentiation Hs biological process
perinuclear region of cytoplasm Hs cellular component
axon extension Hs biological process
cardiac muscle tissue development Hs biological process
dendrite morphogenesis Hs biological process
regulation of immune response Hs biological process
cell adhesion molecule binding Hs molecular function
leukocyte migration Hs biological process
regulation of cell cycle Hs biological process
positive regulation of protein kinase B signaling Hs biological process
cardiac muscle cell differentiation Hs biological process
recycling endosome Hs cellular component
extracellular exosome Hs cellular component
invadopodium membrane Hs cellular component
basement membrane organization Hs biological process
synaptic membrane Hs cellular component
collagen binding involved in cell-matrix adhesion Hs molecular function
positive regulation of protein localization to plasma membrane Hs biological process
positive regulation of receptor activity Hs biological process
amyloid-beta binding Hs molecular function
complement component C3b binding Hs molecular function
leukocyte migration involved in inflammatory response Hs biological process
phagocytosis Hs biological process
phagocytosis, engulfment Hs biological process
apoptotic process Hs biological process
cell-cell signaling Hs biological process
aging Hs biological process
regulation of cell shape Hs biological process
protein kinase binding Hs molecular function
ICAM-3 receptor activity Hs molecular function
neutrophil chemotaxis Hs biological process
heat shock protein binding Hs molecular function
toll-like receptor 4 signaling pathway Hs biological process
integrin alphaL-beta2 complex Hs cellular component
integrin alphaM-beta2 complex Hs cellular component
specific granule membrane Hs cellular component
endodermal cell differentiation Hs biological process
endothelial cell migration Hs biological process
plasma membrane raft Hs cellular component
positive regulation of nitric oxide biosynthetic process Hs biological process
regulation of peptidyl-tyrosine phosphorylation Hs biological process
positive regulation of NF-kappaB transcription factor activity Hs biological process
tertiary granule membrane Hs cellular component
cell-cell adhesion Hs biological process
cytoplasmic region Hs cellular component
ficolin-1-rich granule membrane Hs cellular component
extracellular vesicle Hs cellular component
neutrophil migration Hs biological process

GO (Blast)

58 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
virus receptor activity Hs molecular function 483 1.68e-159
ruffle Hs cellular component 483 1.68e-159
fibronectin binding Hs molecular function 483 1.68e-159
protease binding Hs molecular function 483 1.68e-159
actin binding Hs molecular function 483 1.68e-159
receptor activity Hs molecular function 483 1.68e-159
integrin binding Hs molecular function 483 1.68e-159
protein binding Hs molecular function 483 1.68e-159
nucleoplasm Hs cellular component 457 1.39e-149
cytoplasm Hs cellular component 483 1.68e-159
endosome Hs cellular component 483 1.68e-159
centrosome Hs cellular component 457 1.39e-149
plasma membrane Hs cellular component 483 1.68e-159
focal adhesion Hs cellular component 483 1.68e-159
integrin complex Hs cellular component 483 1.68e-159
external side of plasma membrane Hs cellular component 483 1.68e-159
cell surface Hs cellular component 483 1.68e-159
intercalated disc Hs cellular component 483 1.68e-159
coreceptor activity Hs molecular function 483 1.68e-159
membrane Hs cellular component 483 1.68e-159
integral component of membrane Hs cellular component 483 1.68e-159
C-X3-C chemokine binding Hs molecular function 483 1.68e-159
lamellipodium Hs cellular component 483 1.68e-159
cell junction Hs cellular component 483 1.68e-159
filopodium Hs cellular component 483 1.68e-159
cytoplasmic vesicle Hs cellular component 483 1.68e-159
neuromuscular junction Hs cellular component 483 1.68e-159
cleavage furrow Hs cellular component 483 1.68e-159
ruffle membrane Hs cellular component 483 1.68e-159
integrin alpha1-beta1 complex Hs cellular component 483 1.68e-159
integrin alpha2-beta1 complex Hs cellular component 483 1.68e-159
integrin alpha3-beta1 complex Hs cellular component 483 1.68e-159
integrin alpha4-beta7 complex Hs cellular component 444 1.56e-144
integrin alpha7-beta1 complex Hs cellular component 483 1.68e-159
integrin alpha8-beta1 complex Hs cellular component 483 1.68e-159
integrin alpha10-beta1 complex Hs cellular component 483 1.68e-159
integrin alpha11-beta1 complex Hs cellular component 483 1.68e-159
integrin alphav-beta6 complex Hs cellular component 457 1.39e-149
myelin sheath abaxonal region Hs cellular component 483 1.68e-159
sarcolemma Hs cellular component 483 1.68e-159
melanosome Hs cellular component 483 1.68e-159
cell projection Hs cellular component 483 1.68e-159
dendritic spine Hs cellular component 483 1.68e-159
receptor complex Hs cellular component 483 1.68e-159
laminin binding Hs molecular function 483 1.68e-159
macromolecular complex binding Hs molecular function 483 1.68e-159
membrane raft Hs cellular component 483 1.68e-159
synapse Hs cellular component 483 1.68e-159
cadherin binding Hs molecular function 483 1.68e-159
metal ion binding Hs molecular function 483 1.68e-159
protein heterodimerization activity Hs molecular function 483 1.68e-159
perinuclear region of cytoplasm Hs cellular component 483 1.68e-159
cell adhesion molecule binding Hs molecular function 483 1.68e-159
recycling endosome Hs cellular component 483 1.68e-159
extracellular exosome Hs cellular component 483 1.68e-159
invadopodium membrane Hs cellular component 483 1.68e-159
synaptic membrane Hs cellular component 483 1.68e-159
collagen binding involved in cell-matrix adhesion Hs molecular function 483 1.68e-159

GO (InterProScan)

No result

GO Term Analysis Type e-value

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